Practices
As a hands-on practical course, we will introduce many practices to be
practiced during and out of the course. This page collects a variety of practices for
practice.
Practices
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PubMed
- Literature search with PubMed and database query with
the NCBI Entrez system.
[Practice1]
-
Align
- Pairwise and multiple sequence alignment using both local and global algorithms.
[Practice2]
-
UniProt
- Find protein sequences from the UniProt/Swiss-Prot database and browse the entries.
[Practice3]
-
BLAST
-Sequence similarity search against DNA and protein sequence databases.
[Practise4]
-
Phylogeny
- Phylogenetic analysis and construction of phylogenetic tress with simple examples.
[Practise5]
-
3D Analysis
- Analysis of three-dimensional structure of proteins.
[Practise6]
-
3D Prediction
- Prediction of protein structure.
[Practise7]
-
Examples
- Examples of sequence and structure analysis.
[Practise8]
29 April 2025
J Luo,
CBI,
PKU, Beijing, China