SpliceView Output for fragment 3 (20001-30100)

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Acceptor sites

Donor sites

ID   FRAG3               
XX
OS   Homo sapiens
XX
CC   direct strand
XX
SQ   10100 bp
XX
CC   Potential splice signals:
 
DONOR SITES:
POSITION        EXON INTRON    SCORE
      85         CTG GTACGA      79.
     158         GGA GTAAGT      81.
     435         AAG GTGGAG      78.
     858         CCT GTGAGT      83.
     906         AAG GTGACA      79.
    1010         AGG GTCAGG      81.
    1134         GAG GTATTA      76.
    1247         TTG GTAATA      75.
    1282         TAG GTGGAA      75.
    1722         CCG GTAAAC      81.
    1748         AAG GTGACA      86.
    1818         ACG GTAATG      77.
    1898         AAG GTGAAA      84.
    2003         GTG GTGAGA      85.
    2105         CTC GTATGT      75.
    3029         CAG GTAGCG      81.
    3270         AGA GTGAGA      81.
    3278         AAG GTGAGA      89.
    3350         CAG GTGGTG      79.
    3401         GTG GTAGCC      75.
    3960         AGA GTGAGG      81.
    4156         CCA GTAAGA      80.
    4531         GAG GTGCTC      75.
    4559         CAG GTGCAG      78.
    4694         GTG GTGGGT      79.
    4758         ACG GTAGAA      75.
    4910         AAG GTGAGT      93.
    5047         AAG GTGCCT      84.
    5376         GTG GTAGAA      75.
    5448         CGG GTCAGC      81.
    5467         GGG GTGCGT      82.
    6125         CCC GTGAGA      81.
    6140         CGT GTGAGC      82.
    6254         GGA GTAAGG      80.
    6507         AAC GTGAGC      84.
    6549         GTA GTGAGA      81.
    7215         CGG GTACTT      76.
    7226         CAG GTGCAG      76.
    7263         AAG GTGTTT      80.
    7498         AAG GTGCCG      79.
    7609         TCT GTGAGG      77.
    8496         TTG GTACTG      72.
    8662         CAT GTGAGG      84.
    8825         AAT GTGCGT      82.
    9395         GAT GTGTGT      78.
   10050         AGT GTGAGA      80.
 
ACCEPTOR SITES:
POSITION        INTRON EXON    SCORE
      75     GTGTTGAAG GACC      81.
     128     CACCACTAG GCTG      80.
     232     TCTGCTCAG GCTG      85.
     239     AGGCTGCAG GGGT      85.
     472     CTTTTACAG GGCT      84.
     522     TCCCTGCAG ATCG      88.
     532     TCGCCACAG AGGC      80.
     569     GTCCCTCAG CAGA      80.
     572     CCTCAGCAG AGAA      83.
     718     TGCGGACAG GAAC      82.
     770     TTCTCCCAG GCCA      90.
     907     ATGTTGAAG GTGA      77.
    1010     ATTGACCAG GGTC      77.
    1099     TCAATTTAG AAAG      81.
    1160     CGCATACAG ATTT      80.
    1172     TCCTTTTAG ACTT      79.
    1179     AGACTTTAG CATC      79.
    1407     TCATTAAAG GCTT      77.
    1417     CTTTCCCAG ACGA      77.
    1461     CATCCACAG GCAA      78.
    1500     TTTGCTTAG CGTT      80.
    1566     GCTTCCCAG GGTG      88.
    1706     ACCTCTCAG AGGA      79.
    1782     CGCTAACAG GCGG      78.
    1806     CACCTCCAG GAAA      90.
    1884     ATACTCCAG GGGC      79.
    1991     TGACCCCAG AGAG      77.
    2088     TACTGTTAG TTCG      78.
    2132     GCTCTCCAG CGTT      86.
    2140     GCGTTGCAG TTAT      81.
    2146     CAGTTATAG GACA      78.
    2203     CGCCTACAG TCTG      83.
    2262     CACTCACAG AAAC      82.
    2301     CTTTGTCAG AACA      79.
    2329     TATTTCCAG ATCA      82.
    2369     TCTCTGCAG TATT      82.
    2382     TGCATTCAG ACAA      79.
    2420     CAACTGTAG AAGC      82.
    2517     CATTGGCAG GTTG      80.
    2556     CCGTTACAG ATGA      80.
    2581     ATTTTGCAG CGTG      82.
    2752     CTGATCTAG TTTA      77.
    2822     CCCTTTCAG TCAC      91.
    2876     AGGTCTCAG ATCG      77.
    2894     GTCTCCCAG GAGC      82.
    3019     TCATCGAAG GGCT      77.
    3132     TCTGAGCAG AGAT      79.
    3351     TGTTTCCAG GTGG      90.
    3360     GTGGTGCAG GAGG      79.
    3429     ACCATCCAG AACG      83.
    3456     GTGTTCCAG GGAG      83.
    3580     TTTTCCCAG CTTT      82.
    3586     CAGCTTTAG AAGA      82.
    3651     GCTCTTCAG GCTG      92.
    3675     CTTCTCAAG CTTG      79.
    3820     TGTTAACAG GCTG      79.
    3847     GTCTTGTAG TTAG      77.
    4027     TTTTAAAAG AGAA      77.
    4065     TTCCCCCAG CGGG      85.
    4367     TTATCACAG TCGG      77.
    4627     TGGCGGCAG GACT      77.
    4636     GACTTCCAG GCCG      77.
    4807     CGCGCCCAG AACT      77.
    4828     GCCCACCAG GCTG      78.
    4965     TCCACGCAG TACC      80.
    4980     TTGGCATAG AGCG      77.
    5070     CCTGCACAG GCGA      77.
    5121     CCCCATTAG ACTC      81.
    5127     TAGACTCAG ACAA      79.
    5178     GGCCATCAG GTTG      82.
    5197     TTCTCAAAG GCCA      81.
    5222     TCCTCTTAG CGTT      83.
    5283     CCACGGCAG CGTC      79.
    5351     ACGGTGCAG GGCC      82.
    5381     CCGTGGTAG AACT      80.
    5505     CTGGTGCAG TTTA      77.
    5636     GGACAACAG ACGG      77.
    5756     CGTCCACAG TAAA      84.
    5810     CACCCTTAG AAAT      77.
    5923     ACGTACCAG CACA      77.
    5992     CTAACCCAG AAAT      79.
    6051     ACATCACAG TTGG      77.
    6108     TCCCCCCAG CGGA      83.
    6224     TCTACTCAG CTCA      78.
    6276     CTCATCCAG ACAT      80.
    6312     GAGCTCCAG GATG      78.
    6437     TCCCTTCAG AGCG      78.
    6502     TATGAGCAG AACA      78.
    6532     TTCGCCCAG CGCG      79.
    6548     TCTCTTCAG TAGT      85.
    6551     CTTCAGTAG TGAG      81.
    6592     CCATCACAG CACT      83.
    6612     GTAGCTCAG CTGC      77.
    6678     TCTTAACAG ATCT      83.
    6744     GCCTCCTAG TGTT      80.
    6768     TTTTAACAG GAGG      85.
    6904     TATATTTAG TCTA      82.
    6909     TTAGTCTAG TGTT      78.
    7025     CCATCACAG AGGG      84.
    7104     CTGTCCCAG AACG      83.
    7140     TGCTATCAG CATA      77.
    7185     GTTTTAAAG TAGC      78.
    7227     ACTTTGCAG GTGC      84.
    7458     TCGCTCCAG GGCT      81.
    7475     CCTCGGCAG GAGG      84.
    7551     GCCCTCCAG ATAA      78.
    7581     TTGCTCCAG CTGG      81.
    7689     TGGTTTCAG CTCT      85.
    7699     TCTCTGCAG GAGC      87.
    7835     CATCACCAG ACCT      77.
    8122     TTTGCATAG CACT      83.
    8132     ACTTTTTAG CACA      77.
    8327     TCCTGGCAG TGAA      81.
    8440     TGCTTCCAG ATAC      85.
    8759     TTCCCTCAG AAAT      83.
    8771     TCTTTGCAG TTTG      78.
    9021     TGCCTTAAG ATCT      81.
    9040     CCCTTGCAG ATTT      82.
    9069     TCTGAGCAG CTAT      77.
    9085     TTGCTTTAG CCCA      77.
    9090     TTAGCCCAG TGGA      81.
    9256     GTCATAAAG CCGA      80.
    9286     TTACCCCAG TGAA      83.
    9324     TTTAAATAG TCCC      77.
    9433     TACTTGTAG AGAT      79.
    9451     TGTTTATAG AGTC      79.
    9617     GCACCGCAG TTCA      81.
    9705     CATCTAAAG AGCT      77.
    9789     ATGTAGCAG GAAG      77.
    9961     AGTTCACAG CACT      78.
    9971     ACTTCTCAG ATGC      79.
   10003     ATTTCCAAG GTTG      81.

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Last modified: Tue 1 June 1999, office@cbi.pku.edu.cn