Grail analysis result for 12001-26000)
[ EMBnet
| APBioNet
| EBI
| NCBI
| CERNET
| PKU
| CBI ]
[grail1exons -> Exons]
Str Frm Start End ORFstart ORFend Score Quality
1- f 0 121 601 73 612 26.477 excellent
2- f 0 671 868 613 870 18.584 excellent
3- f 2 1961 1991 1923 2045 2.948 good
4- f 0 2441 2541 2410 2634 9.080 excellent
5- f 1 3089 3401 3092 3505 32.402 excellent
6- f 2 3481 3591 3456 3635 8.516 excellent
7- f 1 3911 4101 3866 4288 15.946 excellent
8- f 0 4171 4281 4138 4512 7.829 excellent
9- f 0 5301 5421 5149 5481 9.584 excellent
10- f 2 5471 5591 5400 5636 9.222 excellent
11- f 2 5771 6211 5772 6377 29.248 excellent
12- f 1 6411 6411 6407 6421 0.827 marginal
13- f 1 6601 6781 6554 6823 14.315 excellent
14- f 2 6881 7031 6843 7085 11.184 excellent
15- f 2 7386 7581 7389 7583 18.458 excellent
16- f 0 7939 7961 7942 8022 6.607 excellent
17- f 1 8101 8181 8045 8203 2.961 good
18- f 2 8251 8451 8208 8705 19.430 excellent
19- f 1 8511 8631 8501 8635 6.248 excellent
20- f 0 8741 8851 8644 8862 8.336 excellent
21- f 2 9591 9701 9513 9752 9.716 excellent
22- f 1 9801 9961 9779 10060 11.614 excellent
23- f 0 10841 10981 10801 10989 10.898 excellent
24- f 1 11171 11281 10979 11299 10.479 excellent
25- f 1 11381 11551 11300 11557 15.348 excellent
26- f 2 12121 12171 12087 12263 3.370 good
27- f 2 12571 12681 12546 12689 9.033 excellent
28- f 0 12988 13121 12991 13221 10.517 excellent
29- f 0 13261 13378 13222 13380 6.345 excellent
30- r 2 13911 13951 13914 14002 3.084 good
31- r 1 11591 11611 11537 11623 1.446 marginal
32- r 1 2921 2971 2900 3166 3.119 good
33- r 0 1161 1261 1081 1272 7.678 excellent
34- r 1 781 831 689 1057 4.050 good
35- r 1 356 511 359 610 10.917 excellent
36- r 1 191 301 179 358 8.588 excellent
37- r 1 51 131 4 157 7.053 excellent
[grail1exons -> Exon Translations]
38- FVLSQLLDGVDVKQLNVHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRS
VSMDEIVAAAKAANIHSFIEGLPQVAAVNQGKWLIPHLIDSHGAAHDHLH
HIQTVSEQRYDTQAGDKGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSA
LDTESEKVRL
39- QEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIAKK
GVYHMLVTKQMGYHSG
40- NEKKKKNKKE
41- ADRWDVVLLISGTVMAMVNGTVMPLMCIVFGEM
42- RERHRGAQHSTDGVRIREFPASAFTLCTATLGGVDDLMDVLLFSNGSDVY
KIQEGIGDKVGLLIQAYTTFITAFIIGFTTGWKLTLVILAVSPALAISAA
FFS
43- KVLASFTSKEQTAYAKAGAVAEEVLSAIRTVFAFSGQ
44- RYHKNLRDAKDVGVKKAISSNIAMGFTFLMIYLSYALAFWYGSTLILNFE
YTIGNLLTVSTCG
45- VFFVVLIGAFSVGQTSPNIQNFASARGAAYKVYSII
46- NIDSFSEDGFKPDFIKGDIEFKNIHFNYPSRPEVKVGAS
47- LQILNNMSLSVKSGQTIALVGSSGCGKSTTIQLLQRFYDP
48- VFIDGHDIRSLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEI
ERATKESNAYDFIMNLPDVRPHLWLPYLSLAPSRSNANIYIMISEQKFET
LVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESETI
49-
50- CKLQVRLGRTTIVVAHRLSTIRNADIIAGFSNGKIVEQGTHSQLMEIKGV
YHGLVTMQV
51- VEEENTAMSELSAGEKSPVEKTVSQSSIIRRKSTRGSSFAASEGTKEEKT
52- NSRLRALVPQDEDVPDVSFFKVLHLNIPEWPYILVGLICATINGAMQPVF
AILFSKIITVGPTR
53- PEPEPE
54- NTVGALTTRLAADAAQVQGVSLIRDV
55- ATIMQNFANLGTSIIIAFVYGWELTLLILAVVPLIAAAGAAEIKLLAGHA
AKDKKELEKAGKVELKR
56- SLQIATEAIENVRTVVSLSREPKFECLYEENLRVPYKYD
57- VYGLTYSFSQAMIYFAYAACFRFGAWLIEAGRMDVEG
58- AMAVGEANTFAPNYAKAKMAASYLMMLINKKPAIDN
59- QEKYDGNVHFEGVKFNYPSRPDVTILQGLNLKVKKGETLALVGSSGCGKS
TT
60- VKQLNIHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRSVSMDEIVA
61- SGGQKQRVAIARAIIRNPKLLLLDEATSALDTESEK
62- KGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIAKKGVYHMLVT
KQMGYH
63- NVTNKASIHDRTSKMER
64- SCRQLLKTLNRDTASVWRQDFQADMEITILRVKVQSG
65- NIDSFSEDGFKPDFIKGDIEFKNIHFNYPSRPEVKVGAS
66- LQILNNMSLSVKSGQTIALVGSSGCGKSTTIQLLQRFYDP
67- VFIDGHDIRSLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEI
ERATKESNAYDFIMNLPDVRPHLWLPYLSLAPSRSNANIYIMISEQKFET
LVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESETI
68-
69- CKLQVRLGRTTIVVAHRLSTIRNADIIAGFSNGKIVEQGTHSQLMEIKGV
YHGLVTMQV
70- VEEENTAMSELSAGEKSPVEKTVSQSSIIRRKSTRGSSFAASEGTKEEKT
71- NSRLRALVPQDEDVPDVSFFKVLHLNIPEWPYILVGLICATINGAMQPVF
AILFSKIITVGPTR
72- PEPEPE
73- N1]
EEFRNRTSLLFGDEIQAEKVPVEACTGESDDVTGNIRTPFSPL
74- PSSPPTAASQHTSHDGSVMAVHHFTASTVQGLMVSVLPW
75- TLHFALNINMDL
76- VNGSET
77- GIDQMWNQPFPLIHSR
78- LSSSLVGYTTVLGAVAPMVPHGYGFFYRIREDR
79- KRKAMQLAFEKHNNLM
80- QPSVVQAQDLQVVCYAFTAFGKAAIKQKKLHPDTFIQLAMQLAYFKLHQR
81- SKGVDTVRVLPPPEELVFTVDEKVRSDIGRAKKQYF
82- DAMVLVTMCWYVDQRIQSTGGKWKVV
[grail1aexons -> Exons]
Str Frm Start End ORFstart ORFend Score Quality
83- f 0 110 360 73 612 88.000 excellent
84- f 0 470 592 73 612 88.000 excellent
85- f 0 654 870 613 870 87.000 excellent
86- f 2 1430 1550 1401 1589 54.000 excellent
87- f 2 1950 2020 1923 2045 80.000 excellent
88- f 0 2430 2580 2410 2634 88.000 excellent
89- f 2 2960 3124 2682 3194 88.000 excellent
90- f 1 3162 3429 3092 3505 88.000 excellent
91- f 2 3470 3610 3456 3635 88.000 excellent
92- f 1 3890 4120 3866 4288 88.000 excellent
93- f 0 4200 4290 4138 4512 79.000 excellent
94- f 0 5300 5417 5149 5481 88.000 excellent
95- f 2 5473 5620 5400 5636 88.000 excellent
96- f 2 5772 5980 5772 6377 88.000 excellent
97- f 2 6050 6250 5772 6377 88.000 excellent
98- f 1 6610 6800 6554 6823 88.000 excellent
99- f 2 6870 6980 6843 7085 86.000 excellent
100- f 1 7034 7120 6848 7207 74.000 excellent
101- f 2 7420 7583 7389 7583 88.000 excellent
102- f 1 7870 7990 7814 8026 87.000 excellent
103- f 1 8090 8178 8045 8203 73.000 excellent
104- f 2 8251 8460 8208 8705 88.000 excellent
105- f 1 8530 8570 8501 8635 77.000 excellent
106- f 0 8710 8850 8644 8862 88.000 excellent
107- f 2 9570 9700 9513 9752 88.000 excellent
108- f 1 9780 9990 9779 10060 88.000 excellent
109- f 0 10830 10965 10801 10989 88.000 excellent
110- f 1 11170 11280 10979 11299 88.000 excellent
111- f 1 11350 11550 11300 11557 88.000 excellent
112- f 2 12090 12170 12087 12263 37.000 good
113- f 0 12991 13150 12991 13221 87.000 excellent
114- r 0 1140 1260 1081 1272 87.000 excellent
115- r 0 591 714 496 714 84.000 excellent
116- r 1 370 526 359 610 86.000 excellent
117- r 1 200 300 179 358 81.000 excellent
118- r 1 40 120 1 157 80.000 excellent
[grail1aexons -> Shadow Exons]
Str Frm Start End ORFstart ORFend Score Quality
119- f 2 12592 12660 12546 12689 82.000 excellent
120- f 0 13230 13370 13222 13380 80.000 excellent
121- f 1 13510 13640 13424 13672 86.000 excellent
122- f 1 13820 13880 13673 13999 46.000 good
123- r 2 13640 13790 13587 13892 87.000 excellent
124- r 2 13420 13510 13398 13517 82.000 excellent
125- r 2 13160 13350 13092 13397 85.000 excellent
126- r 1 12520 12600 12263 12604 62.000 excellent
127- r 2 11541 11570 11400 11699 75.000 excellent
128- r 0 11460 11488 11371 11574 56.000 excellent
129- r 0 10918 11080 10864 11106 77.000 excellent
130- r 1 10731 10846 10583 10846 86.000 excellent
131- r 2 10600 10690 10506 10763 86.000 excellent
132- r 1 10515 10530 10415 10549 37.000 good
133- r 0 10440 10470 10390 10605 65.000 excellent
134- r 2 9740 9860 9672 9989 86.000 excellent
135- r 2 8530 8670 8373 8684 87.000 excellent
136- r 0 8156 8210 8014 8265 84.000 excellent
137- r 1 8080 8112 8054 8188 42.000 good
138- r 1 7270 7420 7193 7432 88.000 excellent
139- r 1 6990 7110 6956 7138 88.000 excellent
140- r 1 6800 6890 6746 6919 39.000 good
141- r 0 6460 6555 6394 6609 87.000 excellent
142- r 0 5590 5740 5536 5811 88.000 excellent
143- r 1 5050 5177 5003 5410 56.000 excellent
144- r 1 2910 3020 2900 3166 85.000 excellent
145- r 1 2740 2830 2711 2830 79.000 excellent
146- r 1 2500 2610 2420 2710 65.000 excellent
147- r 0 1448 1470 1273 1581 54.000 excellent
148- r 1 1340 1386 1058 1465 81.000 excellent
149- r 2 955 1030 885 1070 61.000 excellent
150- r 1 758 830 689 1057 64.000 excellent
[grail1aexons -> Exon Translations]
151- LYITFVLSQLLDGVDVKQLNVHWLRSQIGIVSQEPVLFDCSLAENIAYGD
NSRSVSMDEIVAAAKAANIHSFIEGLPQVAAVN
152- KGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESEK
153- CVQVVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQ
LIAKKGVYHMLVTKQMGYHSG
154- SVQLLMIHVRRRRRICGPDACDNRPLSKIDPARRALGHRQ
155- GAKNEKKKKNKKEKPPQEPMVGP
156- FRFADRWDVVLLISGTVMAMVNGTVMPLMCIVFGEMTDSFIYADMAQHN
157- VLGFVVLLAAYMQVSFWTITAGRQVKRIRSLFFHCIMQQEISWFDVNDTG
ELNTR
158- TLCTATLGGVDDLMDVLLFSNGSDVYKIQEGIGDKVGLLIQAYTTFITAF
IIGFTTGWKLTLVILAVSPALAISAAFFSKVRGSCLNP
159- TSFGKVLASFTSKEQTAYAKAGAVAEEVLSAIRTVFAFSGQTREIER
160- PFCVCRFRYHKNLRDAKDVGVKKAISSNIAMGFTFLMIYLSYALAFWYGS
t
r 1 8080 8112 8054 8188 42.000 good
r 1 7270 7420 7193 7432 88.000 excellent
r 1 6990 7110 6956 7138 88.000 excellent
r 1 6800 6890 6746 6919 39.000 good
r 0 6460 6555 6394 6609 87.000 excellent
r 0 5590 5740 5536 5811 88.000 excellent
r 1 5050 5177 5003 5410 56.000 excellent
r 1 2910 3020 2900 3166 85.000 excellent
r 1 2740 2830 2711 2830 79.000 excellent
r 1 2500 2610 2420 2710 65.000 excellent
r 0 1448 1470 1273 1581 54.000 excellent
r 1 1340 1386 1058 1465 81.000 excellent
r 2 955 1030 885 1070 61.000 excellent
r 1 758 830 689 1057 64.000 excellent
[End shadowexons]
[Start exon_translations]
[Num= 36]
[Start translation]
[trans_start= 109]
LYITFVLSQLLDGVDVKQLNVHWLRSQIGIVSQEPVLFDCSLAENIAYGD
NSRSVSMDEIVAAAKAANIHSFIEGLPQVAAVN
161- KGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESEK
162- SVGQTSPNIQNFASARGAAYKVYSIIDNV
163- PNIDSFSEDGFKPDFIKGDIEFKNIHFNYPSRPEVKVGA
164- QILNNMSLSVKSGQTIALVGSSGCGKSTTIQLLQRFYDPEEGAVSQGVH
165- VFIDGHDIRSLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEI
ERATKESNAYDFIMNLPDV
166- ISEQKFETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAE
SETIVQAALDKVQTQTC
167- QVRLGRTTIVVAHRLSTIRNADIIAGFSNGKIVEQGTHSQLMEIKGVYHG
LVTMQVTPPPQRT
168- FHNVEEENTAMSELSAGEKSPVEKTVSQSSIIRRKS
169- GAVLSTTQQQKANIRHLVKVIFILYLIT
170- DEDVPDVSFFKVLHLNIPEWPYILVGLICATINGAMQPVFAILFSKIITV
GPTR
171- SGEILTLKLRLRAFTAMMRQVSSDLNLNLNLTRGFATAT
172- DNPQNTVGALTTRLAADAAQVQGVSLIRD
173- ATIMQNFANLGTSIIIAFVYGWELTLLILAVVPLIAAAGAAEIKLLAGHA
AKDKKELEKAGKVELKRVKF
174- EAIENVRTVVSLS
175- ADRNSQKKAHVYGLTYSFSQAMIYFAYAACFRFGAWLIEAGRMDVE
176- VSAVLYGAMAVGEANTFAPNYAKAKMAASYLMMLINKKPAIDN
177- AALLAHLQEKYDGNVHFEGVKFNYPSRPDVTILQGLNLKVKKGETLALVG
SSGCGKSTTIQLLERFYDP
178- GVNVKQLNIHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRSVS
179- SGGQKQRVAIARAIIRNPKLLLLDEATSALDTESEK
180- VVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIA
KKGVYHMLVTKQMGYH
181- FVNQTENLKLNVTNKASIHDRTSKME
182- EEFRNRTSLLFGDEIQAEKVPVEACTGESDDVTGNIRTPFSPLDSDKVKG
VTH
183- GGGGNFVLSSSLVGYTTVLGAVAPMVPHGYGFFYRIRED
184- CYETAMTRKFYHGRTETMRPCTVEAVKWCTAMTDPSCEVC
185- VQAQDLQVVCYAFTAFGKAAIKQKKLHPDTFIQLAMQLAYFKLHQRYGFH
A
186- VDTVRVLPPPEELVFTVDEKVRSDIGRAKKQYF
187- HAPYDAMVLVTMCWYVDQRIQSTGGK
[grail2exons -> Exons]
St Fr Start End ORFstart ORFend Score Quality
188- f 0 136 342 73 612 97.000 excellent
189- f 0 445 591 73 612 99.000 excellent
190- f 0 664 862 613 870 95.000 excellent
191- f 2 1426 1557 1401 1589 57.000 good
192- f 2 1730 1778 1590 1778 87.000 excellent
193- f 2 1931 2036 1923 2045 99.000 excellent
194- f 0 2431 2590 2410 2634 100.000 excellent
195- f 2 2939 3130 2682 3194 96.000 excellent
196- f 1 3232 3403 3092 3505 91.000 excellent
197- f 1 3913 4146 3866 4288 100.000 excellent
198- f 0 5296 5461 5149 5481 100.000 excellent
199- f 2 5475 5600 5400 5636 90.000 excellent
200- f 2 5772 5975 5772 6377 100.000 excellent
201- f 2 6045 6230 5772 6377 70.000 good
202- f 1 6614 6817 6554 6823 100.000 excellent
203- f 2 6867 7044 6843 7085 99.000 excellent
204- f 2 7419 7565 7389 7583 99.000 excellent
205- f 1 7670 7774 7451 7813 100.000 excellent
206- f 1 8083 8203 8045 8203 64.000 good
207- f 2 8239 8450 8208 8705 97.000 excellent
208- f 1 8522 8635 8501 8635 91.000 excellent
209- f 0 8718 8858 8644 8862 100.000 excellent
210- f 2 9566 9715 9513 9752 99.000 excellent
211- f 1 9806 10003 9779 10060 94.000 excellent
212- f 0 10822 10974 10801 10989 100.000 excellent
213- f 1 11132 11278 10979 11299 99.000 excellent
214- f 1 11351 11557 11300 11557 89.000 excellent
215- r 2 1582 1640 1560 1640 57.000 good
216- r 1 1345 1452 1058 1465 94.000 excellent
217- r 0 1140 1259 1081 1272 100.000 excellent
218- r 2 940 1058 885 1070 80.000 excellent
219- r 1 773 851 689 1057 100.000 excellent
220- r 0 582 705 496 714 98.000 excellent
221- r 1 377 507 359 610 96.000 excellent
222- r 1 59 81 1 157 42.000 marginal
[grail2exons -> Shadow Exons]
St Fr Start End ORFstart ORFend Score Quality
223- f 0 13283 13380 13222 13380 49.000 marginal
224- f 1 13820 13868 13673 13999 63.000 good
225- r 2 13652 13892 13587 13892 61.000 good
226- r 2 13424 13517 13398 13517 91.000 excellent
227- r 0 11437 11574 11371 11574 67.000 good
228- r 2 10647 10703 10506 10763 54.000 good
229- r 2 10026 10139 9999 10139 53.000 good
230- r 2 8509 8684 8373 8684 65.000 good
231- r 0 8104 8241 8014 8265 80.000 excellent
232- r 1 7271 7392 7193 7432 87.000 excellent
233- r 1 6790 6919 6746 6919 47.000 marginal
234- r 1 6378 6520 6341 6520 47.000 marginal
235- r 0 5584 5792 5536 5811 90.000 excellent
236- r 0 4999 5210 4990 5214 42.000 marginal
237- r 1 4109 4243 3887 4345 86.000 excellent
238- r 2 2988 3175 2976 3179 73.000 good
239- r 1 2737 2830 2711 2830 91.000 excellent
[grail2exons -> Exon Translations]
240- LLDGVDVKQLNVHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRSVSMDE
IVAAAKAANIHSFIEGLP
241- RYDTQAGDKGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESE
242- VVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIA
KKGVYHMLVTKQMGYH
243- DSVQLLMIHVRRRRRICGPDACDNRPLSKIDPARRALGHRQQTN
244- RTVNHGLKDRYGRNKR
245- SHDSKDDGAKNEKKKKNKKEKPPQEPMVGPITLVI
246- FRFADRWDVVLLISGTVMAMVNGTVMPLMCIVFGEMTDSFIYADMAQHNA
SGW
247- RFAIYYSVLGFVVLLAAYMQVSFWTITAGRQVKRIRSLFFHCIMQQEISW
FDVNDTGELNTRLT
248- DVYKIQEGIGDKVGLLIQAYTTFITAFIIGFTTGWKLTLVILAVSPALAI
SAAFFS
249- YHKNLRDAKDVGVKKAISSNIAMGFTFLMIYLSYALAFWYGSTLILNFEY
TIGNLLTVSTCGSTFRINEGGEGPDKP
250- KPNIDSFSEDGFKPDFIKGDIEFKNIHFNYPSRPEVKVGASVLHALFHRL
GLMAD
251- ILNNMSLSVKSGQTIALVGSSGCGKSTTIQLLQRFYDPEEG
252- VFIDGHDIRSLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEI
ERATKESNAYDFIMNLP
253- MISEQKFETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDA
ESETIVQAALD
254- VRLGRTTIVVAHRLSTIRNADIIAGFSNGKIVEQGTHSQLMEIKGVYHGL
VTMQVTPPPQRTEMKLK
255- TFHNVEEENTAMSELSAGEKSPVEKTVSQSSIIRRKSTRGSSFAASEGTK
EEKTEEVPC
256- DEDVPDVSFFKVLHLNIPEWPYILVGLICATINGAMQPVFAILFSKII
257- VFADPDRDSVRRKSEFISLMFVVIGCVSFVTMFL
258- WYDNPQNTVGALTTRLAADAAQVQGVSLIRDVTFDLSEA
259- VVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIA
KKGVYHMLVTKQMGYH
260- DSVQLLMIHVRRRRRICGPDACDNRPLSKIDPARRALGHRQQTN
261- RTVNHGLKDRYGRNKR
262- SHDSKDDGAKNEKKKKNKKEKPPQEPMVGPITLVI
263- FRFADRWDVVLLISGTVMAMVNGTVMPLMCIVFGEMTDSFIYADMAQHNA
SGW
264- RFAIYYSVLGFVVLLAAYMQVSFWTITAGRQVKRIRSLFFHCIMQQEISW
FDVNDTGELNTRLT
265- DVYKIQEGIGDKVGLLIQAYTTFITAFIIGFTTGWKLTLVILAVSPALAI
SAAFFS
266- YHKNLRDAKDVGVKKAISSNIAMGFTFLMIYLSYALAFWYGSTLILNFEY
TIGNLLTVSTCGSTFRINEGGEGPDKP
267- KPNIDSFSEDGFKPDFIKGDIEFKNIHFNYPSRPEVKVGASVLHALFHRL
GLMAD
268- ILNNMSLSVKSGQTIALVGSSGCGKSTTIQLtart= 8238]
GVRLATIMQNFANLGTSIIIAFVYGWELTLLILAVVPLIAAAGAAEIKLL
AGHAAKDKKELEKAGKVELK
269- IATEAIENVRTVVSLSREPKFECLYEENLRVPYKYDI
270- NSQKKAHVYGLTYSFSQAMIYFAYAACFRFGAWLIEAGRMDVEGVF
271- RVVSAVLYGAMAVGEANTFAPNYAKAKMAASYLMMLINKKPAIDNLSEEG
272- EKYDGNVHFEGVKFNYPSRPDVTILQGLNLKVKKGETLALVGSSGCGKST
TIQLLERFYDPREGR
273- SLDGVNVKQLNIHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRSVSMDE
274- RYDTQAGDKGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESE
275- VVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIA
KKGVYHMLVTKQMGYHND
276- ETMPNVLNVDESEAQDLRL
277- IVISISAWKSCRQTDAVSLFNVFSSCLHEMLHLAT
278- GGGGNFVLSSSLVGYTTVLGAVAPMVPHGYGFFYRIRED
279- GFDRHLLGLYLIAKEEGRPVPELFLDPLYAKRYCVESAA
280- DNAKRKAMQLAFEKHNNLMAEAQEGR
281- PGCCYETAMTRKFYHGRTETMRPCTVEAVKWCTAMTDPSC
282- AQDLQVVCYAFTAFGKAAIKQKKLHPDTFIQLAMQLAYFKLHQ
283- MVLVTMC
[PolyA Sites]
Str Start End Score
f 1091 1096 0.88
f 7384 7389 0.65
r 3432 3437 0.80
r 3501 3506 0.90
r 12170 12175 0.90
[CPG Islands]
Start End CpGscore GCscore
2337 2548 0.71 53.07
2958 3423 0.77 56.14
7406 7610 0.90 53.47
8089 8445 0.76 57.89
9576 9906 0.77 54.07
12544 13817 0.89 57.10
[Repetitive]
Type Str Start End Score
L1 f 1966 1988 17.00
L1PA2 f 1966 1988 17.00
L1PA7 f 1966 1988 17.00
L1PA11 f 1966 1988 17.00
L1PA15 f 1966 1988 17.00
L1PB1 f 1966 1988 17.00
L1PB3 f 1966 1988 17.00
L1MA2 f 1966 1988 17.00
L1MA5 f 1966 1988 17.00
L1MA9 f 1966 1988 17.00
L1MA10 f 1966 1988 17.00
L1MB3 f 9939 9966 18.00
L1MB7 f 1966 1988 17.00
L1MC2 f 1966 1988 17.00
L1MD1 f 1966 1988 17.00
L1MD2 f 1966 1988 17.00
L1ME2 f 1966 1988 17.00
L1ME3a f 1966 1988 17.00
LTR12 f 12370 12388 17.00
MER11A f 8484 8504 17.00
MER11A r 8484 8504 0.00
ALR f 9215 9251 17.00
TAR1 f 7941 7964 18.00
[Simple Repeats]
Start End Score
2202 2258 163
6780 6798 51
7638 7644 23
[Frame Shift Errors]
Position Add/Del Base
330 add C
862 add C
2427 del T
5770 del A
7037 add C
7418 add C
7569 add C
7963 add C
8909 add C
8953 add C
10976 del T
13634 del A
[ GCG
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Last modified: Sun, 13 June 1999,
office@cbi.pku.edu.cn