Grail analysis result for 1-14000)

[ EMBnet | APBioNet | EBI | NCBI | CERNET | PKU | CBI ]

[grail1exons -> Exons]

      Str Frm  Start    End ORFstart ORFend    Score    Quality
   1-  f   2     101    221        4    233    9.299    excellent
   2-  f   2     291    481      234    491   15.361    excellent
   3-  f   2    2613   2761     2616   2963   12.580    excellent
   4-  f   0    3521   3641     3397   4065   12.023    excellent
   5-  f   1    4161   4221     4133   4261    2.947    good
   6-  f   0    4411   4541     4357   4584   10.446    excellent
   7-  f   1    4561   4763     4553   4765   20.359    excellent
   8-  f   0    5611   5691     5584   5811    7.006    excellent
   9-  f   2    5801   5911     5718   5978    6.239    excellent
  10-  f   2    6261   6431     6255   6890   16.126    excellent
  11-  f   2    6541   6761     6255   6890   17.942    excellent
  12-  f   1    7111   7231     7073   7399   11.060    excellent
  13-  f   2    7351   7401     7245   7607    4.795    good
  14-  f   0    7801   7901     7675   7971    7.064    excellent
  15-  f   1    9591   9671     9539   9697    4.967    good
  16-  f   2    9741   9921     9702   9977   16.474    excellent
  17-  f   1   10041  10091     9983  10135    1.737    marginal
  18-  f   2   11261  11351    11217  11444    6.767    excellent
  19-  f   2   11491  11641    11460  11714   10.692    excellent
  20-  f   0   12121  12601    12073  12612   26.477    excellent
  21-  f   0   12671  12868    12613  12870   18.584    excellent
  22-  r   2   13321  13341    13299  13367    1.170    marginal
  23-  r   1   10591  10651    10553  10663    3.543    good
  24-  r   2   10151  10321    10098  10454   15.397    excellent
  25-  r   0    6671   6701     6664   6834    1.340    marginal
  26-  r   1    5534   5611     5537   5647    2.529    good
  27-  r   2    1911   1981     1914   2009    5.713    excellent


[grail1exons -> Exon Translations]

  28- QLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESEKVR

  29- QEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIAKK
GVYHMLVTKQMGQ

  30- FRFADGWDILMVTIGVLMAIVNGLVNPLMCIVFGEMTDSFIQEAKLSQ

  31- AYLQMSLWTLTAARQAKRIRELFFHGIMQQDISWYDVTET

  32- TAYAKAGAVAAEVLSSIRT

  33- GIKKGVAANTATGFSFLMIYLSYALAFWYGTTLVLNKEYTIGN

  34- DIITSTIKNKSVAAETVTTCVQMKVFFVVLYGAYIIGQASPNVQSFASAR
GAAYKVYNIIDHVSPVV

  35- PNIDSFSEDGYKPEYIKGDIVFQNIH

  36- PQILNDMSFHVRNGQTIALVGSSGCGKSTTIQLLQRF

  37- IDGHDIRSLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEIER
ATKESN

  38- QKFETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESET
IVQAALDKVQTQTRAEMMGNKET

  39- IVIAHRLSTIRNADIIAGFSNGEIVEQGTHSQLMEIKGV

  40- QKLEDLEDSDYEPWVAE

  41- VSEWPYILVGTICAMINGAMQPVFSIIFTEIIM

  42- KNTVGALTTRLAADAAHVQGVSLIRD

  43- LAVMTQNFANLGTSIIISFVYGWELTLLILAVVPILAVAGAAEVKLLTGH
AAEDKKELEM

  44- AIENVRTVVSLTREPT

  45- LYGAMAVGEANTYAPNFAKAKISASHLTML

  46- KYDGNVLFEDVKFNYPSRPDVPVLQGLNLEVQKGETLALVGSSGCGKSTT

  47- FVLSQLLDGVDVKQLNVHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRS
VSMDEIVAAAKAANIHSFIEGLPQVAAVNQGKWLIPHLIDSHGAAHDHLH
HIQTVSEQRYDTQAGDKGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSA
LDTESEKVRL

  48- QEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIAKK
GVYHMLVTKQMGYHSG

  49- ESSELKR

  50- YRLAIKMSERTGADMVGDL

  51- MYKTNNKGSDKGGGRLDQQTRLVTDALLDLVDIVRTRESNTTYDNDHASC
DRNWSVY

  52- KMSQDGRSDY

  53- HLWDLLERETHIMDVQLMLMLSCQ

  54- TLHFALNINMDLVDLEKADDHV


[grail1aexons -> Exons]

      Str Frm  Start    End ORFstart ORFend    Score    Quality
  55-  f   2      70    210        1    233   88.000    excellent
  56-  f   2     280    490      234    491   88.000    excellent
  57-  f   0    1280   1450     1180   1491   88.000    excellent
  58-  f   2    2620   2780     2616   2963   88.000    excellent
  59-  f   0    3470   3680     3397   4065   88.000    excellent
  60-  f   0    3750   3890     3397   4065   88.000    excellent
  61-  f   1    4140   4230     4133   4261   73.000    excellent
  62-  f   0    4380   4530     4357   4584   88.000    excellent
  63-  f   1    4620   4760     4553   4765   88.000    excellent
  64-  f   0    5630   5700     5584   5811   80.000    excellent
  65-  f   2    5810   5930     5718   5978   79.000    excellent
  66-  f   2    6260   6460     6255   6890   88.000    excellent
  67-  f   2    6530   6720     6255   6890   88.000    excellent
  68-  f   1    7110   7259     7073   7399   88.000    excellent
  69-  f   2    7320   7530     7245   7607   88.000    excellent
  70-  f   0    7790   7910     7675   7971   87.000    excellent
  71-  f   1    9580   9680     9539   9697   86.000    excellent
  72-  f   2    9747   9920     9702   9977   88.000    excellent
  73-  f   1   10020  10080     9983  10135   83.000    excellent
  74-  f   2   10230  10360    10119  10373   62.000    excellent
  75-  f   2   11240  11330    11217  11444   86.000    excellent
  76-  f   2   11480  11670    11460  11714   88.000    excellent
  77-  f   0   12110  12360    12073  12612   88.000    excellent
  78-  f   0   12470  12592    12073  12612   88.000    excellent
  79-  f   0   12654  12870    12613  12870   87.000    excellent
  80-  f   2   13430  13550    13401  13589   54.000    excellent


[grail1aexons -> Shadow Exons]

      Str Frm  Start    End ORFstart ORFend    Score    Quality
  81-  r   0   13800  13890    13777  13896   85.000    excellent
  82-  r   0   13530  13730    13486  13776   87.000    excellent
  83-  r   1   11361  11440    11195  11500   82.000    excellent
  84-  r   0   11260  11300    11209  11430   59.000    excellent
  85-  r   0   10327  10480    10243  10515   68.000    excellent
  86-  r   2   10150  10282    10098  10454   88.000    excellent
  87-  r   2    9770   9870     9735   9887   45.000         good
  88-  r   0    7650   7720     7531   7773   87.000    excellent
  89-  r   1    6740   6910     6653   6916   88.000    excellent
  90-  r   1    6350   6430     6302   6481   87.000    excellent
  91-  r   0    6110   6207     6097   6207   87.000    excellent
  92-  r   0    5580   5630     5503   5706   76.000    excellent
  93-  r   1    4330   4400     4304   4453   82.000    excellent
  94-  r   0    4030   4250     3928   4317   88.000    excellent
  95-  r   1    3620   3700     3551   3703   51.000    excellent
  96-  r   2    1640   1790     1587   1892   87.000    excellent
  97-  r   2    1420   1510     1398   1517   82.000    excellent
  98-  r   2    1160   1350     1092   1397   85.000    excellent
  99-  r   1     520    600      263    604   62.000    excellent


[grail1aexons -> Exon Translations]

 100- YDTQAGDKGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESE

 101- VQVVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQL
IAKKGVYHMLVTKQMGQHSG

 102- FREVIIMVLGSSAVTSEEGKQSIKVNAIEISGASEVTLTLKKESHNPQCQ
RQLSSFM

 103- RFADGWDILMVTIGVLMAIVNGLVNPLMCIVFGEMTDSFIQEAKLSQNHN
TSN

 104- FRFSIYYSILGFAVLVVAYLQMSLWTLTAARQAKRIRELFFHGIMQQDIS
WYDVTETGELNTRLTEWVTH

 105- HDVYKIQEGIGDKAGLLIQAASTFITSFVIGFVHGWKLTLVILAIS

 106- SFTSKEQTAYAKAGAVAAEVLSSIRTVFA

 107- HKNLEDARDMGIKKGVAANTATGFSFLMIYLSYALAFWYGTTLVLNKEY

 108- VQMKVFFVVLYGAYIIGQASPNVQSFASARGAAYKVYNIIDHVSPV

 109- SEDGYKPEYIKGDIVFQNIHFSY

 110- LNDMSFHVRNGQTIALVGSSGCGKSTTIQLLQRFYDPQKG

 111- FIDGHDIRSLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEIE
RATKESNAYDFIMNLPD

 112- MISEQKFETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDA
ESETIVQAALDKVQ

 113- IVIAHRLSTIRNADIIAGFSNGEIVEQGTHSQLMEIKGVYHGLVTMQVS

 114- LGHLFLLQSFQKLEDLEDSDYEPWVAEKSQLIESFSQSSLQRRRSTRGSL
LAVSEGTKEEKEKFECDQDN

 115- MRYNVSEWPYILVGTICAMINGAMQPVFSIIFTEIIMVHY

 116- YDNPKNTVGALTTRLAADAAHVQGVSLIRDVTF

 117- VMTQNFANLGTSIIISFVYGWELTLLILAVVPILAVAGAAEVKLLTGHAA
EDKKELE

 118- SLQIATEAIENVRTVVSLT

 119- NSQKKAKIYGLTYSFSQAMIFFVYAACFRFGAWLIEAGRMDVE

 120- PSVVMTMLYGAMAVGEANTYAPNFAKAKIS

 121- RLQEKYDGNVLFEDVKFNYPSRPDVPVLQGLNLEVQKGETLALVGSSGCG
KSTTIQLLERFYDP

 122- LYITFVLSQLLDGVDVKQLNVHWLRSQIGIVSQEPVLFDCSLAENI translation]

[trans_start= 3469]
FRFSIYYSILGFAVLVVAYLQMSLWTLTAARQAKRIRELFFHGIMQQDIS
WYDVTETGELNTRLTEWVTH

 123- HDVYKIQEGIGDKAGLLIQAASTFITSFVIGFVHGWKLTLVILAIS

 124- SFTSKEQTAYAKAGAVAAEVLSSIRTVFA

 125- HKNLEDARDMGIKKGVAANTATGFSFLMIYLSYALAFWYGTTLVLNKEY

 126- KGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESEK

 127- CVQVVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQ
LIAKKGVYHMLVTKQMGYHSG

 128- SVQLLMIHVRRRRRICGPDACDNRPLSKIDPARRALGHRQ


[grail2exons -> Exons]

      St Fr Start     End ORFstart ORFend     Score      Quality
 129-  f 2     66     212       1     233    96.000    excellent
 130-  f 2    285     483     234     491    99.000    excellent
 131-  f 0   1197    1491    1180    1491    63.000         good
 132-  f 1   2296    2380    2216    2404    92.000    excellent
 133-  f 2   2616    2781    2616    2963    99.000    excellent
 134-  f 0   3474    3655    3397    4065    90.000    excellent
 135-  f 1   4133    4257    4133    4261   100.000    excellent
 136-  f 0   4377    4552    4357    4584   100.000    excellent
 137-  f 1   4605    4747    4553    4765    87.000    excellent
 138-  f 2   5805    5930    5718    5978   100.000    excellent
 139-  f 2   6255    6458    6255    6890   100.000    excellent
 140-  f 2   6528    6713    6255    6890    70.000         good
 141-  f 1   7091    7252    7073    7399    98.000    excellent
 142-  f 2   7344    7548    7245    7607    89.000    excellent
 143-  f 0   7753    7933    7675    7971   100.000    excellent
 144-  f 1   9161    9295    9155    9322    72.000         good
 145-  f 1   9577    9697    9539    9697    69.000         good
 146-  f 2   9733    9929    9702    9977   100.000    excellent
 147-  f 1  10031   10135    9983   10135    82.000    excellent
 148-  f 2  10229   10369   10119   10373   100.000    excellent
 149-  f 2  11243   11399   11217   11444    95.000    excellent
 150-  f 2  11487   11684   11460   11714   100.000    excellent
 151-  f 0  12136   12342   12073   12612   100.000    excellent
 152-  f 0  12445   12591   12073   12612    99.000    excellent
 153-  f 0  12664   12862   12613   12870    95.000    excellent
 154-  f 2  13426   13557   13401   13589    57.000         good
 155-  f 2  13730   13778   13590   13778    87.000    excellent
 156-  f 2  13931   13999   13923   13999    95.000    excellent


[grail2exons -> Shadow Exons]

      St Fr Start     End ORFstart ORFend     Score      Quality
 157-  r 1  11264   11500   11195   11500    43.000     marginal
 158-  r 1  11044   11130   11012   11152    56.000         good
 159-  r 1  10610   10659   10553   10663    64.000         good
 160-  r 2  10149   10454   10098   10454    68.000         good
 161-  r 0   7621    7754    7531    7773    57.000         good
 162-  r 1   6794    6893    6653    6916    99.000    excellent
 163-  r 1   6528    6622    6482    6622    57.000         good
 164-  r 0   6106    6207    6097    6207    80.000    excellent
 165-  r 0   5421    5502    5383    5502    64.000         good
 166-  r 0   4039    4230    3928    4317    60.000         good
 167-  r 0   3634    3722    3610    3726    74.000         good
 168-  r 2   1652    1892    1587    1892    62.000         good
 169-  r 2   1424    1517    1398    1517    91.000    excellent


[grail2exons -> Exon Translations]

 170- RYDTQAGDKGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESE

 171- VVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIA
KKGVYHMLVTKQMGQH

 172- SHTKMPSVTHVTTQIFDKIKEKNTRNVFREVIIMVLGSSAVTSEEGKQSI
KVNAIEISGASEVTLTLKKESHNPQCQRQLSSFMQPRQQNNLKQQIK

 173- YGSCSDNKNNVEEEEKASKQPLIGPIT

 174- FRFADGWDILMVTIGVLMAIVNGLVNPLMCIVFGEMTDSFIQEAKLSQNH
NTSNP

 175- FSIYYSILGFAVLVVAYLQMSLWTLTAARQAKRIRELFFHGIMQQDISWY
DVTETGELNT

 176- LLTSFTSKEQTAYAKAGAVAAEVLSSIRTVFAFSGQRKAIK

 177- YHKNLEDARDMGIKKGVAANTATGFSFLMIYLSYALAFWYGTTLVLNKEY
TIGNLLTV

 178- TVTTCVQMKVFFVVLYGAYIIGQASPNVQSFASARGAAYKVYNIID

 179- ILNDMSFHVRNGQTIALVGSSGCGKSTTIQLLQRFYDPQKG

 180- IFIDGHDIRSLNIRYLREMIGVVSQEPVLFATTITENIRYGRLDVTQEEI
ERATKESNAYDFIMNLP

 181- MISEQKFETLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDA
ESETIVQAALD

 182- VRLGRTTIVIAHRLSTIRNADIIAGFSNGEIVEQGTHSQLMEIKGVYHGL
VTM

 183- SFQKLEDLEDSDYEPWVAEKSQLIESFSQSSLQRRRSTRGSLLAVSEGTK
EEKEKFECDQDNIEEVSC

 184- DENVPPVSFFKVMRYNVSEWPYILVGTICAMINGAMQPVFSIIFTEIIMV
HYPVPFTFLC

 185- MDNDIMTHHISSKQFWGFQGFCFSKSGEILTLNLRLKAFISMMR

 186- WYDNPKNTVGALTTRLAADAAHVQGVSLIRDVTFDLSEA

 187- GVRLAVMTQNFANLGTSIIISFVYGWELTLLILAVVPILAVAGAAEVKLL
TGHAAEDKKELEMAG

 188- IATEAIENVRTVVSLTREPTFVALYEENLTVPYK

 189- RNSQKKAKIYGLTYSFSQAMIFFVYAACFRFGAWLIEAGRMDVEGVF

 190- SVVMTMLYGAMAVGEANTYAPNFAKAKISASHLTMLINRQPAIDNLSEEE
AR

 191- EKYDGNVLFEDVKFNYPSRPDVPVLQGLNLEVQKGETLALVGSSGCGKST
TIQLLERFYDPREGR

 192- LLDGVDVKQLNVHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRSVSMDE
IVAAAKAANIHSFIEGLP

 193- RYDTQAGDKGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTESE

 194- 
 195- YHKNLEDARDMGIKKGVAANTATGFSFLMIYLSYALAFWYGTTLVLNKEY
TIGNLLTV

 196- TVTTCVQMKVFFVVLYGAYIIGQASPNVQSFASARGAAYKVYNIID

 197- ILNDMSFHVRNGQTIALVGSSGCGKSTTIQLLQRFYDPQKG

 198- IFIDGHDIRSLNIRYLREMIG2664]
VVQEALDQARKGRTCIVVAHRLSTIQNADCIAVFQGGVVVEKGTHQQLIA
KKGVYHMLVTKQMGYH

 199- DSVQLLMIHVRRRRRICGPDACDNRPLSKIDPARRALGHRQQTN

 200- RTVNHGLKDRYGRNKR

 201- SHDSKDDGAKNEKKKKNKKEKPP


[PolyA Sites]

Str  Start    End  Score
 f     980    985   0.90
 f    1251   1256   0.80
 f   13091  13096   0.88
 r     170    175   0.90
 r    3581   3586   0.80
 r    4545   4550   0.80
 r    9699   9704   0.88


[CPG Islands]

 Start    End CpGscore GCscore
  3509   3804     0.75   54.58


[Repetitive]

    Type Str  Start    End    Score
      L1  f   13966  13988    17.00
      L1  f    4858   4884    17.00
      L1  f    4858   4884    17.00
      L1  f    4858   4884    17.00
      L1  f    4858   4884    17.00
      L1  f    4858   4884    17.00
      L1  f    4858   4884    17.00
      L1  f    4858   4884    17.00
   L1PA2  f   13966  13988    17.00
   L1PA2  f    4858   4884    17.00
   L1PA2  f    4858   4884    17.00
   L1PA2  f    4858   4884    17.00
   L1PA2  f    4858   4884    17.00
   L1PA2  f    4858   4884    17.00
   L1PA2  f    4858   4884    17.00
   L1PA2  f    4858   4884    17.00
   L1PA7  f   13966  13988    17.00
   L1PA7  f    4858   4884    17.00
   L1PA7  f    4858   4884    17.00
   L1PA7  f    4858   4884    17.00
   L1PA7  f    4858   4884    17.00
   L1PA7  f    4858   4884    17.00
   L1PA7  f    4858   4884    17.00
   L1PA7  f    4858   4884    17.00
  L1PA11  f   13966  13988    17.00
  L1PA11  f    4858   4884    17.00
  L1PA11  f    4858   4884    17.00
  L1PA11  f    4858   4884    17.00
  L1PA11  f    4858   4884    17.00
  L1PA11  f    4858   4884    17.00
  L1PA11  f    4858   4884    17.00
  L1PA11  f    4858   4884    17.00
  L1PA15  f   13966  13988    17.00
  L1PA15  f    4858   4884    17.00
  L1PA15  f    4858   4884    17.00
  L1PA15  f    4858   4884    17.00
  L1PA15  f    4858   4884    17.00
  L1PA15  f    4858   4884    17.00
  L1PA15  f    4858   4884    17.00
  L1PA15  f    4858   4884    17.00
   L1PB1  f   13966  13988    17.00
   L1PB1  f    4858   4884    17.00
   L1PB1  f    4858   4884    17.00
   L1PB1  f    4858   4884    17.00
   L1PB1  f    4858   4884    17.00
   L1PB1  f    4858   4884    17.00
   L1PB1  f    4858   4884    17.00
   L1PB1  f    4858   4884    17.00
   L1PB3  f   13966  13988    17.00
   L1PB3  f    4858   4884    17.00
   L1PB3  f    4858   4884    17.00
   L1PB3  f    4858   4884    17.00
   L1PB3  f    4858   4884    17.00
   L1PB3  f    4858   4884    17.00
   L1PB3  f    4858   4884    17.00
   L1PB3  f    4858   4884    17.00
   L1MA2  f   13966  13988    17.00
   L1MA2  f    4858   4884    17.00
   L1MA2  f    4858   4884    17.00
   L1MA2  f    4858   4884    17.00
   L1MA2  f    4858   4884    17.00
   L1MA2  f    4858   4884    17.00
   L1MA2  f    4858   4884    17.00
   L1MA2  f    4858   4884    17.00
   L1MA5  f   13966  13988    17.00
   L1MA5  f    4858   4884    17.00
   L1MA5  f    4858   4884    17.00
   L1MA5  f    4858   4884    17.00
   L1MA5  f    4858   4884    17.00
   L1MA5  f    4858   4884    17.00
   L1MA5  f    4858   4884    17.00
   L1MA5  f    4858   4884    17.00
   L1MA9  f   13966  13988    17.00
   L1MA9  f    4858   4884    17.00
   L1MA9  f    4858   4884    17.00
   L1MA9  f    4858   4884    17.00
   L1MA9  f    4858   4884    17.00
   L1MA9  f    4858   4884    17.00
   L1MA9  f    4858   4884    17.00
   L1MA9  f    4858   4884    17.00
  L1MA10  f   13966  13988    17.00
  L1MA10  f    4858   4884    17.00
  L1MA10  f    4858   4884    17.00
  L1MA10  f    4858   4884    17.00
  L1MA10  f    4858   4884    17.00
  L1MA10  f    4858   4884    17.00
  L1MA10  f    4858   4884    17.00
  L1MA10  f    4858   4884    17.00
   L1MB3  f    4858   4884    17.00
   L1MB3  f   11620  11647    18.00
   L1MB7  f   13966  13988    17.00
   L1MB7  f    4858   4884    17.00
   L1MB7  f    4858   4884    17.00
   L1MB7  f    4858   4884    17.00
   L1MB7  f    4858   4884    17.00
   L1MB7  f    4858   4884    17.00
   L1MB7  f    4858   4884    17.00
   L1MB7  f    4858   4884    17.00
   L1MC2  f   13966  13988    17.00
   L1MC2  f    4858   4884    17.00
   L1MC2  f    4858   4884    17.00
   L1MC2  f    4858   4884    17.00
   L1MC2  f    4858   4884    17.00
   L1MC2  f    4858   4884    17.00
   L1MC2  f    4858   4884    17.00
   L1MC2  f    4858   4884    17.00
   L1MD1  f   13966  13988    17.00
   L1MD1  f    4858   4884    17.00
   L1MD1  f    4858   4884    17.00
   L1MD1  f    4858   4884    17.00
   L1MD1  f    4858   4884    17.00
   L1MD1  f    4858   4884    17.00
   L1MD1  f    4858   4884    17.00
   L1MD1  f    4858   4884    17.00
   L1MD2  f   13966  13988    17.00
   L1MD2  f    4858   4884    17.00
   L1MD2  f    4858   4884    17.00
   L1MD2  f    4858   4884    17.00
   L1MD2  f    4858   4884    17.00
   L1MD2  f    4858   4884    17.00
   L1MD2  f    4858   4884    17.00
   L1MD2  f    4858   4884    17.00
   L1MD2  r    4858   4884     0.00
   L1ME2  f   13966  13988    17.00
   L1ME2  f    4858   4884    17.00
   L1ME2  f    4858   4884    17.00
   L1ME2  f    4858   4884    17.00
   L1ME2  f    4858   4884    17.00
   L1ME2  f    4858   4884    17.00
   L1ME2  f    4858   4884    17.00
   L1ME2  f    4858   4884    17.00
  L1ME3a  f   13966  13988    17.00
  L1ME3a  f    4858   4884    17.00
  L1ME3a  f    4858   4884    17.00
  L1ME3a  f    4858   4884    17.00
  L1ME3a  f    4858   4884    17.00
  L1ME3a  f    4858   4884    17.00
  L1ME3a  f    4858   4884    17.00
  L1ME3a  f    4858   4884    17.00
   LTR12  f    8377   8398    18.00
   MER28  f    2997   3015    17.00


[Simple Repeats]

 Start    End  Score
  5221   5331    107
  4858   4890     67
  7052   7074     59
  8889   8893     12


[Frame Shift Errors]

Position   Add/Del   Base
    3757     add       C
    4552     del       A
    4752     add       C
    9926     add       C
   11255     del       A
   12330     add       C
   12862     add       C



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Last modified: Sun, 13 June 1999, office@cbi.pku.edu.cn