WebGene output for Frag3, Exon mode
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ID mrd3-exon
XX
OS Fugu sp.
XX
CC Search in direct strand
XX
CC Results of exon prediction by GeneBuilder' system
CC using ESTs, coding potential and similarity with key protein(s)
CC URL: www.itba.mi.cnr.it/webgene
XX
CC Good splice signals mode
XX
CC No restriction on 1st and last CDS
XX
CC All potential CDS were used for prediction
XX
FH Key Location/Qualifiers
FH
FT CDS 83..149
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=excellent quality
FT /translation="WYDNPQNTVGALTTRLAADAAQ"
FT CDS 83..158
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=excellent quality
FT /translation="GTTIPKTPLALSPLGWLPTPPKYK"
FT CDS 239..435
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=excellent quality
FT /translation="VRLATIMQNFANLGTSIIIAFVYGWELTLLILAVVPLIAAAGAAE
FT IKLLAGHAAKDKKELEKAGK"
FT CDS 532..632
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=excellent quality
FT /translation="AIENVRTVVSLSREPKFECLYEENLRVPYKYDI"
FT CDS 770..858
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=good quality
FT /translation="AMIYFAYAACFRFGAWLIEAGRMDVEGVF"
FT CDS 1566..1749
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=good quality
FT /translation="VVSAVLYGAMAVGEANTFAPNYAKAKMAASYLMMLINKKPAIDNL
FT SEEGTSPVNTQDPAQR"
FT CDS 2822..2986
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=good quality
FT /translation="SLDGVNVKQLNIHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRS
FT VSMDEIVACC"
FT CDS 2992..3270
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=excellent quality
FT /translation="ANIHSFIEGLPQVAAVNQGKWLIPHLIDSHGAAHDHLHHIHTVSE
FT QRYDTQAGDKGTQLSGGQKQRVAIARAIIRNPKLLLLDEATSALDTE"
FT CDS 4540..4662
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=good quality
FT /translation="LRRCCQVQHLVQTAAEDVEQGHGVGLAAGLPGRYGNHNPA"
FT CDS 4582..4686
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=good quality
FT /translation="LLKTLNRDTASVWRQDFQADMEITILRVKVQSGYD"
FT CDS 5070..5131
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=good quality
FT /translation="ESDDVTGNIRTPFSPLDSDK"
FT CDS 5197..5420
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=excellent quality
FT /translation="QLHGFPLSVVLKQKSPRVKPRPPRHPRQRLNTPRTTGPSWPCTIS
FT PPPRCRASWSPSCRGRTCESWLSRSNTLA"
FT CDS 5315..5377
FT /note=potential CDS predicted by GeneBuilder system
FT /note=CDS:AUG-stop codon
FT /note=excellent quality
FT /translation="MAVHHFTASTVQGLMVSVLPW"
FT CDS 5505..5549
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=good quality
FT /translation="LKYASCIASWMNVS"
FT CDS 5556..5669
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=excellent quality
FT /translation="LFLLDGGFSESREGVTDNLQVLRLDNRRLSLHRPHWQR"
FT CDS 5616..5688
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=excellent quality
FT /translation="SCAWTTDGCHSTGHTGNASSTSQN"
FT CDS 5830..5892
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=excellent quality
FT /translation="HAFNLKSAENGNGDYLPFAS"
FT CDS 6156..6237
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=good quality
FT /translation="KKQGRTVRHRLGSRLDASVIYSAHTLV"
FT CDS 6251..6341
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=excellent quality
FT /translation="GVRLRLIQTYGEQAALDELQDGLVVRINTY"
FT CDS 6499..6549
FT /note=potential CDS predicted by GeneBuilder system
FT /note=internal protein-coding exon
FT /note=excellent quality
FT /translation="QNNVSGHTFAQRVLSSV"
FT CDS 6678..6707
FT /note=potential CDS predicted by GeneBuilder system
FT /note=last CDS
FT /note=good quality
FT /translation="IYINELLKWK"
XX
SQ 10100 BP; 2808 A; 2350 C; 2289 G; 2653 T; 0 other;
ccgcccacaa atacagtttt gattgaggtt tcatcaaata ttgatgtaaa atctcaatcc 60
tctctgtgtt gaaggacctc agctggtacg acaatcccca aaacaccgtt ggcgctctca 120
ccactaggct ggctgccgac gccgcccaag tacaaggagt aagtctgatc agggacgtga 180
catttgacct cagcgaggcc taattaacgg aggatgctcc tctctgctca ggctgcaggg 240
gtgcgcctgg cgacaataat gcagaacttc gccaacctgg gcaccagcat catcatcgcc 300
tttgtttacg gctgggagct gaccctgctc atcctggccg tggtgcccct catcgcggcc 360
gccggagccg ctgagatcaa gctgctcgcg ggtcacgccg ccaaagacaa gaaggagctg 420
gagaaggccg gaaaggtgga gttgaagcga gttaaattcg accttttaca gggctgccat 480
tgtggcataa gaaaaaataa aagtgtggtt tctccctgca gatcgccaca gaggccatcg 540
agaacgtcag aaccgtcgtg tccctcagca gagaaccaaa atttgagtgt ttatatgagg 600
agaatctcag agtgccgtac aagtatgaca tatgacatcc taatatcatc cacgaggata 660
tttacattca tcaacattga attttttcct cctcccttct cttgattttg cggacaggaa 720
ctcccagaaa aaggcccacg tgtacggctt aacctactcc ttctcccagg ccatgatcta 780
ctttgcttac gctgcctgtt tccgcttcgg agcctggctg attgaagcag gacggatgga 840
cgtggaggga gtgttcctgt gagtacagac acagcacggc ctgatgatgg cttctgtatg 900
ttgaaggtga catttacact gagcacgagg agacgtgcaa aggcactggc agggcagtaa 960
agtgataaat gaaatcctga acagtttgtg gcttctaatc attgaccagg gtcaggacag 1020
catcacgctc agaccctcaa tgattcaaca cacacacatg tgtttctgcc gggggagctt 1080
cacattcttt caatttagaa agggatataa agtaacataa atcattaaac cgaggtatta 1140
ccctctcaca cgcatacaga tttcctttta gactttagca tcttgatatt ttacacaatt 1200
ttgataaatt ccatgaccac acttggaaat agctttttgt ggagttggta ataatgacgt 1260
caacgcacca aattcaatct aggtggaaga acactgatta aaataattgg tacaaatgag 1320
aaactttttg agaatttaat taataacttc tgaagttctt caaaaataag cactgtacaa 1380
acatatttat cacttagtca ttaaaggctt tcccagacga tatggaaccg tttattaaat 1440
tattattcaa acatccacag gcaaccgttg aagaatgcct ttgtttcatg tttgcttagc 1500
gttatgcaat agggtttgat aatgttacga aatgacacta atgtttattt aactttgctt 1560
cccagggtgg tttctgcggt gctgtacggc gccatggccg tgggggaagc taacaccttt 1620
gctccgaact acgccaaggc caaaatggct gcttcctacc tgatgatgct aataaacaag 1680
aagcccgcca ttgataacct ctcagaggag gggacgtctc cggtaaacac gcaagacccc 1740
gcacaaaggt gacaaaccct gttccacacg cacgctaaca ggcggctctt ctcgcccacc 1800
tccaggaaaa atacgacggt aatgtgcatt tcgagggtgt taaattcaac tacccgtcgc 1860
ggcccgatgt gaccatactc caggggctga acctgaaggt gaaaaaggga gaaactctgg 1920
ccttggtggg cagcagcggt tgtggaaaga gcaccaccat ccagctgctg gagaggtttt 1980
atgaccccag agaggggaga gtggtgagaa gacaaacaca atgtgctgtg gttttttttc 2040
ctcccgttat ctccatataa cccccgtgcc tcttcaccta ctgttagttc gataatgatt 2100
agctcgtatg tgttttattg ctgctctcca gcgttgcagt tataggacag agatcatcga 2160
gatctgtgca gtacggatgt ttgttcttta ctgcgcctac agtctgttta tgttgatcag 2220
taacaagatt catagttatc caaaatcttt tacactcaca gaaacactat atcagaccca 2280
ccactgagct gctttgtcag aacattcttg taacgtcatt atttccagat cactaactca 2340
taactggtgg tctgttgact ctctgcagta tttgcattca gacaaatgta gctgcaggga 2400
tcctctttcg caactgtaga agcttagaac aggactaaaa gggctaaaag agaagaactg 2460
aaaccaaaca tttatgtaaa ctctgattaa cagatttatt atatgctcat tggcaggttg 2520
agaaaattga tcacaagcca aatttgccgt tacagatgat ttttttattg aattttgcag 2580
cgtgggcgcc ccctgctgtt tatacatata tagacaaagc atttaaaaca ttctctaaaa 2640
aaagcattta gttcatcatt ttcattacaa aaggacattt aaaggcttct acaccttcac 2700
aaaactattt ttgatgcagt atgactgaca tcactgctac ctctgatcta gtttagctcc 2760
cataaaatgt tttggttttt aagacaccat acaaagctaa agttctcctt ttccctttca 2820
gtcactggac ggtgtcaacg tgaaacagct gaacattcac tggctgaggt ctcagatcgg 2880
catcgtctcc caggagccgg tgctgttcga ctgctccctg gctgagaaca tcgcctacgg 2940
agacaacagt cgctccgtgt ccatggatga gatagtagct tgctgctaaa gcagccaaca 3000
tccacagctt catcgaaggg ctgcctcagg tagcggctgt gaatcagggg aaatggttga 3060
ttccacattt gatcgattcc catggagctg cccatgacca tttacaccat atacatactg 3120
tctctgagca gagatacgac actcaggctg gtgataaggg aacacagctg tcagggggcc 3180
agaagcagcg tgtcgccata gcccgagcca tcatccgcaa ccccaaactg ttgctcctgg 3240
acgaggccac gtctgcgctc gacactgaga gtgagaaggt gagactttat tcacactagt 3300
gctacgtagt ccataaggcc gctgcacaac actgcacctc ttgtttccag gtggtgcagg 3360
aggcgttgga ccaggccagg aagggcagga cgtgcatcgt ggtagcccac cgtctgtcca 3420
ccatccagaa cgccgactgc atcgctgtgt tccagggagg agtggtggtg gaaaagggga 3480
cgcaccagca gctgatcgcc aagaagggag tgtaccacat gctggtcacc aaacagatgg 3540
gctatcacaa cgactgagag gacgcccgtg ttttcccagc tttagaagaa cattttagag 3600
tctgaaatgt aatttatgaa ctgtcgttcc tcgtttctct tgctcttcag gctgagacat 3660
ccgtccttct caagcttgca acattcgagc acttctataa aaccaacctt tactgctgct 3720
gacctttaac ctcacctgca tttaactgcc aaacacacgt gcagtgactg aagttggcag 3780
aacgctggat tatttatgcg ctgcggtgcc tgttaacagg ctgtttactg caattatgtc 3840
ttgtagttag tgtagttcaa ttcttttatt tgatcatata tttgtggttg aagtctgaac 3900
tgaaacactg aaaaatgtat cctgtaacca gactggcaaa agacttcagt tcaattcaga 3960
gtgaggacgt gttgacagca ttttatgaaa cttgattgat ttctgattgt tggttgtttt 4020
taaaagagaa tgtgggggtg tagacaggac gcctcttccc ccagcggggg gtcttatgtg 4080
ctttaacgtt tcgtgaatca aacagaaaat ttgaaactaa acgtgaccaa caaagcatcg 4140
atccacgaca ggaccagtaa gatggagcga acgtgccacc acacagcaga aagacaccaa 4200
gacaaacagc tgatgggttg ttcaagttta aaaagtttca atttcaagtc tttgttaaaa 4260
taacagcctt aatgcagctc taatgtacag taaatactga agaattcatc aataaaatga 4320
aaataatttc tagcaaaatc aataatcagt ctaacattta tcacagtcgg aggtcttgag 4380
cttcactctc atcgacattt aacacattcg gcatcgtttc tacataatca aggaggcaca 4440
tttacagccc aaaagaaaag tgctacatga aacttcaaga gaaaaacaaa gggaaggttt 4500
gcatcgatca gaggttttgt tggatgtgga ggtgctcaga gctgagacgt tgttgccagg 4560
tgcagcatct cgtgcagaca gctgctgaag acgttgaaca gggacacggc gtcggtctgg 4620
cggcaggact tccaggccga tatggaaatc acaatcctgc gggtcaaagt gcagagcgga 4680
tatgactgaa tgtggtgggt caaaccgtga cgacagcaga gtgatccgtc agtaggccca 4740
cctgtcctct cggatacggt agaagaagcc gtagccgtgg ggaaccatcg gcgccaccgc 4800
gcccagaact gtggtgtagc ccaccaggct ggacgacagc acaaagtttc cgccaccgcc 4860
actgcacaac acagacagca tggaaaaacc agcccgtttc tgaataaaag gtgagtgaag 4920
ctaactagcc ttaagacgga acgctagcag cgctttccac gcagtacctc ttggcataga 4980
gcggatctaa gaagagttcc ggaacaggac gtccctcctc tttggcgatg agatacaggc 5040
cgagaaggtg cctgtcgaag cctgcacagg cgagagcgac gacgtaacag gaaatattcg 5100
gacgccgttc tccccattag actcagacaa agtgaagggc gtgactcacc tcgtccttcc 5160
tgggcctcgg ccatcaggtt gttgtgtttc tcaaaggcca gctgcatggc tttcctctta 5220
gcgttgtcct gaaacagaaa tcgccacgcg tcaagccccg ccctcctcgc cacccacggc 5280
agcgtctcaa cacacctcgc acgacgggtc cgtcatggcc gtgcaccatt tcaccgcctc 5340
cacggtgcag ggcctcatgg tctccgtcct gccgtggtag aacttgcgag tcatggctgt 5400
ctcgtagcaa caccctggcc tgagaggagc gggggggaga cattccgggt cagcccgcca 5460
ccccggggtg cgtttgctgc gtgaaatcca tacctctggt gcagtttaaa gtacgccagc 5520
tgcatcgcca gttggatgaa cgtgtccggg tgcagctttt tctgcttgat ggcggctttt 5580
ccgaaagccg tgaaggcgta acagacaacc tgcaggtcct gcgcctggac aacagacggc 5640
tgtcactcca ccggccacac tggcaacgct agctccacct cacaaaactg actcaccgac 5700
tcaaagtatt gttttttcgc acggccgatg tcgctgcgga ctttttcgtc cacagtaaac 5760
accagctcct cgggaggcgg caggactctg actgtgtcca cacccttaga aatatcacaa 5820
tgttaatagc gcacgccttc aatttaaaga gcgccgagaa tgggaatggt gactaccttc 5880
catttgcctc cggtgctttg aattcgctgg tccacgtacc agcacatggt caccagcacc 5940
atggcgtcgt acggcgcgtg ctgcaaaaca aaatgacgtt ctctaaccca gaaatgtgtc 6000
gtttgcgtgc gtctgaacct tcgccgggcg catcacaact cacatcacag ttggatccaa 6060
acgttccatc tgaatagacg actgaattgt aggatttgtc cccccagcgg atggtgggat 6120
cacccgtgag agactcccgt gtgagctgcg ttcagaaaaa agcaggggcg cacagtcaga 6180
caccgtttag gcagccggct ggacgcatcc gtgatctact cagctcatac gttggtgtag 6240
ttctctggag tggagtaagg ctgcgtctca tccagacata tggtgaacag gctgctctgg 6300
atgagctcca ggatggtctc gttgtgcgga tcaatactta ttagatactc tcgggcctgc 6360
ggtcgatgga ggcagaaaca ggaagtgaaa ggacaaatgc ttgagcacgc ttctgtaata 6420
tgagagttcc cttcagagcg aacaatagaa acacacagca accgctaaaa gcttctgcaa 6480
catcgttggt tttatgagca gaacaacgtg agcggccata ccttcgccca gcgcgtcctc 6540
tcttcagtag tgagagcgct cactccctcc ccctctgggt tcccatcaca gcactgtctc 6600
acgtagctca gctgcctggc aagaaaaaga gaaacaaaac gctgataata ataatgatat 6660
tgatcatttc ttaacagatc tacattaatg agctgctgaa atggaagtaa ataggggtgt 6720
cacaacccct gactgcctcc tagtgttttg gatttttatt ttaacaggag gaaagatata 6780
attaacaata accacaataa tgcactaata agggacttag ccatcaaaat ggccaaatcc 6840
cttattagtt cattaattag ggaagaggtc atgatttgag cagtgtttct tttctatatt 6900
tagtctagtg ttattagaag tatcagccct tcaaaacata gctttcaggc agctgtgatg 6960
tcagtactta ctgtataatt actacctgaa cagttctggg ggcgtcagta tttgtccatc 7020
acagagggca tcaaatgtga agatgcgtcc acgacaaaga accaccaaat gggaagggca 7080
cctcccctcg agctctgtcc cagaacgacg agatggaacc tgaattgctg tgctatcagc 7140
atatacgcgt gtcgaaagtg ccgtttctcg cacctgtttt aaagtagcta cgaatagcgt 7200
ctttcgtcac cccgggtact ttgcaggtgc agtacagcat cctgaactgg tccatatcta 7260
aaggtgtttc gccagctttc tgcggcgcca acctctccct gaaacaaggg agagaggccg 7320
agcgcatgaa accctggcaa aagaggcaaa aaaattctgc ttcctacgaa tgaggaacgg 7380
tttcagaatg tgcctcacgt gcggatcaga ttccagtact gcagcatatg ccacgagcaa 7440
atactggctc gctccagggc tgttccctcg gcaggaggcc agcagtgttc cagataaggt 7500
gccggccctg cgaagttcac agtcagctga gaggggctgc ggccctccag ataagcagcg 7560
tctaaccacc attgctccag ctgggaggac agcacagtgt taaacatctg tgaggacaga 7620
ggaggtctgt gaaatggaaa acaagaggtt tagagatcag atacacaccc agttcctcct 7680
ggtttcagct ctctgcagga gcctctggtg cagctctttt ccaacaccct gttggaagtt 7740
cctcacaatg tcctctgtgg ccttgaattc cttctcggac gcaaaaggac gaactgttgg 7800
gaggaaaaac aaaaatcaaa tttaccatca ccagacctga aaaataaata gcttttataa 7860
agcctgacac atcagaaaat agccagaaaa ttctattttt ttggaaatga gatgtttatt 7920
gaacctttta acaaaatccc aatttttttt tgattttgtt tatgacattt tttttgtatc 7980
aaatatgata cattaggcga tttcggcaac ttttagctca cgactatgtt aactttagac 8040
acaaaaacaa agtttgccca taacattttg acaatataga acatgaacaa caacattttt 8100
ctctttggtt tttttgcata gcacttttta gcacaagagg cacactgcag cctcttttac 8160
ggggtggtgt tggagttgtt tctggagagg acagtggtct gccacacttg actttggttt 8220
agaaaaaaga gacgtctcag aatctcacgt atcaaatatg atacaaacgg ctttaaaggg 8280
ttaagtgtat ctataagtgt gatacttcat tattcactcc tggcagtgaa aacaatgaaa 8340
gagtcacaag aaagtgtaca aacgtcagtt tagtttaaaa atatgcagat ttaattaaca 8400
aataataaca cagaactcaa atatcctacc tgcttccaga tacttagaaa ggctagtttc 8460
cagtgatggg acgggcaggg gaggcagact actttggtac tggaaggtcc gttctggaac 8520
tgattctgac aatttattag ccatttattc tccctgcaat acaaataaag ttgtcactaa 8580
cacaaagtgg aggctgatat cgttctggtt gattctgaat ttaagacgtt taaagctcaa 8640
gagcaggtta tagtagaagc atgtgaggac attgtgtttg tctgcttaaa tctgaaattg 8700
catttgctgt ttatgcaaat aagatgggga aagaaagtta ttgcatggtt tccctcagaa 8760
atctttgcag tttgaaaaca ctccacacaa atgtaatgga gcgtatttct atgattgcat 8820
ttaatgtgcg tggcgttaaa tgcaactaat cttagaaagc tgtattgtat aagaacacaa 8880
acgttgaact ttgacctttg aaacacttgg tctaattcca agcgcgctag atgtgcagcc 8940
cacattaatc atacaaaaca aaacatgaca ttttattggc gcgaatttat aagatcaaag 9000
caatctttta ttgccttaag atcttactaa cccttgcaga tttattgcgt ttaacttact 9060
ctgagcagct atatcttgct ttagcccagt ggatcacaaa tttaatatac gtatcagcac 9120
aacgaaccta tataaagctg tcgctttaaa cgtgaaagta aaattgaact tcaaataaaa 9180
cttactagct cagaaaatcg gtctgctcgc cttcttcacg atgcgtcgat gatgctttat 9240
ttttttgtca taaagccgaa ttatcaggtt tcacctttac cccagtgaac cgaaggtttg 9300
ttgtcttctc gtattttaaa tagtcccgcc ccgctctgct gtgattggct acccctcctg 9360
cacggcgatt ggtctggttc ggttgtcaac ctgatgtgtg tcgtcatcgc tttgagaatg 9420
ttttacttgt agagattctg ctgtttatag agtcactgat cactaacgct gacagcctaa 9480
tgggagacat tgcgttctgc actttgctaa ataattaagg aaagcaacct gtgcaaaatg 9540
attcctcctt cctgacttct aattggtcga gggctcttta gcccgcccca cgccccgccc 9600
acttccggca ccgcagttca tgcatgctgc cagcggttgt aaaatagatg taatttatgg 9660
agattacttt ttccctaatc gtttgtggaa ttcttcatct aaagagctag tcacagtaga 9720
gcaagggttt ataaaaagga accacagaag aaaacctttt aaagagattt tattttcaaa 9780
tgtagcagga agttcacatt ttcgggggct cagactattc tgaaactaca ttaatctgat 9840
aaaactacag tttacaaatg tgttaataga gtccattgtt agctgttata aatcaatgtt 9900
aatcttctac gtaaaaagac aaaatttaaa aagaaactga gataatcgtt tagttcacag 9960
cacttctcag atgccgtatt tgctgattac ttcatttcca aggttgatgt aatctgacat 10020
ggcctcatcc tgggacattc ctgaaagagt gtgagaaaag atctttcaat tgaaaacaca 10080
attgatccat tttatccaaa 10100
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Last modified: Sun, 11 July 1999,
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