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Tue 06 Jul 16:03:45 1999: Restriction enzymes result list
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Sequence yhm2.fasta
Number of enzymes = 85
Number of matches = 2010
Matches found= 13
Name Sequence Position Fragment lengths
1 AATII GACGT'C 11522 11521 61
2 AATII GACGT'C 14396 2874 457
3 AATII GACGT'C 14457 61 781
4 AATII GACGT'C 15238 781 1228
5 AATII GACGT'C 18370 3132 1663
6 AATII GACGT'C 19598 1228 2220
7 AATII GACGT'C 21261 1663 2369
8 AATII GACGT'C 21718 457 2874
9 AATII GACGT'C 25013 3295 3132
10 AATII GACGT'C 28236 3223 3202
11 AATII GACGT'C 30456 2220 3223
12 AATII GACGT'C 32825 2369 3295
13 AATII GACGT'C 36027 3202 3925
3925 11521
Matches found= 16
Name Sequence Position Fragment lengths
1 ACCI GT'CTAC 3759 3758 20
2 ACCI GT'CTAC 4729 970 715
3 ACCI GT'CGAC 7274 2545 718
4 ACCI GT'ATAC 8033 759 759
5 ACCI GT'CGAC 10162 2129 970
6 ACCI GT'CTAC 11909 1747 1066
7 ACCI GT'CTAC 15238 3329 1146
8 ACCI GT'CTAC 17204 1966 1247
9 ACCI GT'CTAC 18451 1247 1747
10 ACCI GT'AGAC 24042 5591 1966
11 ACCI GT'AGAC 30566 6524 2129
12 ACCI GT'CGAC 31281 715 2545
13 ACCI GT'CGAC 37002 5721 3329
14 ACCI GT'CGAC 37022 20 3758
15 ACCI GT'CTAC 37740 718 5591
16 ACCI GT'CTAC 38806 1066 5721
1146 6524
Matches found= 6
Name Sequence Position Fragment lengths
1 AFLII C'TTAAG 1847 1846 170
2 AFLII C'TTAAG 2017 170 1846
3 AFLII C'TTAAG 10571 8554 4085
4 AFLII C'TTAAG 24931 14360 5098
5 AFLII C'TTAAG 29016 4085 5838
6 AFLII C'TTAAG 34114 5098 8554
5838 14360
Matches found= 41
Name Sequence Position Fragment lengths
1 AFLIII A'CGTGT 1014 1013 2
2 AFLIII A'CATGT 1078 64 8
3 AFLIII A'CACGT 1153 75 9
4 AFLIII A'CATGT 1225 72 12
5 AFLIII A'CACGT 2601 1376 39
6 AFLIII A'CGTGT 2609 8 64
7 AFLIII A'CACGT 2821 212 72
8 AFLIII A'CATGT 3141 320 75
9 AFLIII A'CGCGT 3653 512 148
10 AFLIII A'CGTGT 4617 964 160
11 AFLIII A'CATGT 5816 1199 177
12 AFLIII A'CATGT 6055 239 212
13 AFLIII A'CATGT 6232 177 212
14 AFLIII A'CACGT 6244 12 228
15 AFLIII A'CGTGT 6246 2 237
16 AFLIII A'CACGT 6727 481 239
17 AFLIII A'CACGT 10827 4100 245
18 AFLIII A'CGCGT 13484 2657 282
19 AFLIII A'CGCGT 13712 228 294
20 AFLIII A'CATGT 17486 3774 318
21 AFLIII A'CGTGT 19436 1950 320
22 AFLIII A'CGCGT 19965 529 481
23 AFLIII A'CGTGT 20739 774 512
24 AFLIII A'CATGT 21057 318 529
25 AFLIII A'CACGT 23756 2699 608
26 AFLIII A'CGTGT 23968 212 774
27 AFLIII A'CGCGT 25247 1279 964
28 AFLIII A'CGTGT 25541 294 1013
29 AFLIII A'CGCGT 27146 1605 1199
30 AFLIII A'CGTGT 30227 3081 1279
31 AFLIII A'CATGT 31989 1762 1376
32 AFLIII A'CACGT 32137 148 1605
33 AFLIII A'CACGT 32146 9 1762
34 AFLIII A'CATGT 32306 160 1913
35 AFLIII A'CGTGT 34300 1994 1950
36 AFLIII A'CATGT 34908 608 1994
37 AFLIII A'CATGT 35153 245 2328
38 AFLIII A'CGTGT 37066 1913 2657
39 AFLIII A'CGTGT 37348 282 2699
40 AFLIII A'CATGT 37585 237 3081
41 AFLIII A'CGTGT 37624 39 3774
2328 4100
Matches found= 38
Name Sequence Position Fragment lengths
1 AHAII GA'CGCC 1902 1901 45
2 AHAII GA'CGCC 3032 1130 61
3 AHAII GG'CGTC 4770 1738 93
4 AHAII GA'CGCC 9634 4864 125
5 AHAII GG'CGCC 11267 1633 167
6 AHAII GA'CGTC 11519 252 182
7 AHAII GA'CGTC 14393 2874 194
8 AHAII GA'CGTC 14454 61 211
9 AHAII GG'CGCC 15024 570 218
10 AHAII GA'CGTC 15235 211 251
11 AHAII GA'CGTC 18367 3132 252
12 AHAII GA'CGTC 19595 1228 283
13 AHAII GA'CGCC 20140 545 332
14 AHAII GA'CGTC 21258 1118 487
15 AHAII GG'CGCC 21590 332 545
16 AHAII GA'CGTC 21715 125 560
17 AHAII GG'CGCC 22587 872 568
18 AHAII GA'CGCC 23563 976 570
19 AHAII GA'CGCC 24050 487 750
20 AHAII GG'CGTC 24610 560 842
21 AHAII GG'CGCC 24792 182 872
22 AHAII GA'CGTC 25010 218 872
23 AHAII GA'CGCC 25103 93 947
24 AHAII GG'CGTC 25945 842 976
25 AHAII GG'CGTC 27003 1058 1058
26 AHAII GG'CGCC 27286 283 1118
27 AHAII GA'CGTC 28233 947 1130
28 AHAII GA'CGTC 30453 2220 1228
29 AHAII GG'CGCC 32027 1574 1317
30 AHAII GG'CGCC 32072 45 1478
31 AHAII GA'CGTC 32822 750 1574
32 AHAII GA'CGCC 33073 251 1633
33 AHAII GG'CGTC 33641 568 1738
34 AHAII GG'CGTC 34513 872 1901
35 AHAII GA'CGCC 35830 1317 2220
36 AHAII GA'CGTC 36024 194 2283
37 AHAII GA'CGCC 37502 1478 2874
38 AHAII GG'CGTC 37669 167 3132
2283 4864
Matches found= 3
Name Sequence Position Fragment lengths
1 APAI GGGCC'C 14017 14016 2379
2 APAI GGGCC'C 16396 2379 2645
3 APAI GGGCC'C 37307 20911 14016
2645 20911
Matches found= 11
Name Sequence Position Fragment lengths
1 APALI G'TGCAC 1670 1669 8
2 APALI G'TGCAC 2597 927 8
3 APALI G'TGCAC 2605 8 359
4 APALI G'TGCAC 6051 3446 887
5 APALI G'TGCAC 6059 8 927
6 APALI G'TGCAC 11008 4949 1487
7 APALI G'TGCAC 16148 5140 1669
8 APALI G'TGCAC 25322 9174 3446
9 APALI G'TGCAC 37219 11897 4949
10 APALI G'TGCAC 38106 887 5140
11 APALI G'TGCAC 38465 359 9174
1487 11897
Matches found= 3
Name Sequence Position Fragment lengths
1 ASUII TT'CGAA 17033 17032 227
2 ASUII TT'CGAA 37203 20170 2522
3 ASUII TT'CGAA 39725 2522 17032
227 20170
Matches found= 22
Name Sequence Position Fragment lengths
1 AVAI C'CCGAG 137 136 59
2 AVAI C'CCGGG 2558 2421 124
3 AVAI C'TCGAG 2900 342 136
4 AVAI C'TCGAG 3965 1065 307
5 AVAI C'TCGAG 6614 2649 335
6 AVAI C'CCGGG 8164 1550 342
7 AVAI C'TCGGG 9378 1214 544
8 AVAI C'CCGAG 12516 3138 581
9 AVAI C'TCGGG 13619 1103 737
10 AVAI C'CCGGG 13678 59 1007
11 AVAI C'CCGAG 16245 2567 1065
12 AVAI C'TCGGG 17252 1007 1103
13 AVAI C'CCGAG 17587 335 1214
14 AVAI C'TCGAG 18131 544 1340
15 AVAI C'CCGAG 19471 1340 1550
16 AVAI C'CCGAG 23203 3732 2260
17 AVAI C'CCGGG 25463 2260 2270
18 AVAI C'TCGGG 25770 307 2421
19 AVAI C'TCGGG 26351 581 2567
20 AVAI C'TCGAG 27088 737 2649
21 AVAI C'CCGGG 27212 124 3138
22 AVAI C'CCGGG 37682 10470 3732
2270 10470
Matches found= 49
Name Sequence Position Fragment lengths
1 AVAII G'GACC 303 302 79
2 AVAII G'GTCC 696 393 98
3 AVAII G'GTCC 1049 353 101
4 AVAII G'GTCC 1617 568 125
5 AVAII G'GTCC 1696 79 200
6 AVAII G'GACC 2103 407 230
7 AVAII G'GTCC 2367 264 264
8 AVAII G'GACC 3543 1176 294
9 AVAII G'GACC 4029 486 302
10 AVAII G'GTCC 4510 481 308
11 AVAII G'GTCC 5386 876 320
12 AVAII G'GTCC 6624 1238 348
13 AVAII G'GTCC 7091 467 353
14 AVAII G'GTCC 7451 360 360
15 AVAII G'GTCC 7549 98 372
16 AVAII G'GTCC 7650 101 393
17 AVAII G'GTCC 8386 736 407
18 AVAII G'GTCC 8706 320 467
19 AVAII G'GACC 9569 863 481
20 AVAII G'GACC 10136 567 486
21 AVAII G'GTCC 12055 1919 505
22 AVAII G'GACC 12682 627 538
23 AVAII G'GTCC 13477 795 558
24 AVAII G'GACC 15008 1531 565
25 AVAII G'GACC 15566 558 567
26 AVAII G'GTCC 16131 565 568
27 AVAII G'GTCC 18141 2010 584
28 AVAII G'GACC 18266 125 627
29 AVAII G'GTCC 18614 348 734
30 AVAII G'GTCC 18986 372 736
31 AVAII G'GTCC 19570 584 783
32 AVAII G'GACC 20075 505 795
33 AVAII G'GACC 23369 3294 863
34 AVAII G'GACC 24152 783 876
35 AVAII G'GTCC 25308 1156 897
36 AVAII G'GTCC 25616 308 946
37 AVAII G'GTCC 25910 294 1058
38 AVAII G'GTCC 27250 1340 1156
39 AVAII G'GTCC 28507 1257 1176
40 AVAII G'GACC 30151 1644 1238
41 AVAII G'GACC 31097 946 1257
42 AVAII G'GTCC 33352 2255 1340
43 AVAII G'GTCC 34410 1058 1442
44 AVAII G'GACC 34948 538 1501
45 AVAII G'GTCC 35178 230 1531
46 AVAII G'GTCC 35912 734 1644
47 AVAII G'GTCC 36809 897 1919
48 AVAII G'GACC 38251 1442 2010
49 AVAII G'GTCC 38451 200 2255
1501 3294
Matches found= 10
Name Sequence Position Fragment lengths
1 BALI TGG'CCA 2671 2670 356
2 BALI TGG'CCA 3881 1210 725
3 BALI TGG'CCA 4237 356 892
4 BALI TGG'CCA 13297 9060 1189
5 BALI TGG'CCA 14486 1189 1210
6 BALI TGG'CCA 15378 892 2670
7 BALI TGG'CCA 26833 11455 2943
8 BALI TGG'CCA 32698 5865 3586
9 BALI TGG'CCA 36284 3586 5865
10 BALI TGG'CCA 39227 2943 9060
725 11455
Matches found= 5
Name Sequence Position Fragment lengths
1 BAMHI G'GATCC 5926 5925 2720
2 BAMHI G'GATCC 16300 10374 3379
3 BAMHI G'GATCC 19679 3379 3655
4 BAMHI G'GATCC 22399 2720 5925
5 BAMHI G'GATCC 26054 3655 10374
13898 13898
Matches found= 32
Name Sequence Position Fragment lengths
1 BANI G'GTGCC 1373 1372 45
2 BANI G'GTGCC 3948 2575 62
3 BANI G'GCACC 4050 102 62
4 BANI G'GTGCC 9430 5380 102
5 BANI G'GCACC 9775 345 207
6 BANI G'GTGCC 9837 62 214
7 BANI G'GCGCC 11266 1429 226
8 BANI G'GTGCC 13951 2685 257
9 BANI G'GCACC 14498 547 345
10 BANI G'GCGCC 15023 525 525
11 BANI G'GCACC 16447 1424 547
12 BANI G'GTGCC 17411 964 684
13 BANI G'GCACC 17637 226 767
14 BANI G'GTGCC 19035 1398 861
15 BANI G'GCACC 20281 1246 964
16 BANI G'GTGCC 20343 62 985
17 BANI G'GCGCC 21589 1246 997
18 BANI G'GCGCC 22586 997 1030
19 BANI G'GTGCC 23806 1220 1220
20 BANI G'GCGCC 24791 985 1246
21 BANI G'GTGCC 25048 257 1246
22 BANI G'GCACC 27078 2030 1372
23 BANI G'GCGCC 27285 207 1398
24 BANI G'GTGCC 27499 214 1424
25 BANI G'GCACC 29608 2109 1429
26 BANI G'GTACC 30292 684 1734
27 BANI G'GCGCC 32026 1734 2030
28 BANI G'GCGCC 32071 45 2039
29 BANI G'GTGCC 32838 767 2109
30 BANI G'GTACC 33699 861 2575
31 BANI G'GTGCC 36883 3184 2685
32 BANI G'GTGCC 37913 1030 3184
2039 5380
Matches found= 33
Name Sequence Position Fragment lengths
1 BANII GAGCT'C 791 790 9
2 BANII GAGCT'C 3648 2857 11
3 BANII GAGCC'C 6335 2687 39
4 BANII GAGCT'C 6621 286 81
5 BANII GAGCC'C 6842 221 120
6 BANII GAGCT'C 6851 9 221
7 BANII GAGCC'C 7388 537 235
8 BANII GGGCT'C 8668 1280 256
9 BANII GAGCT'C 11981 3313 271
10 BANII GGGCT'C 13533 1552 274
11 BANII GAGCC'C 14006 473 286
12 BANII GGGCC'C 14017 11 286
13 BANII GAGCT'C 15113 1096 435
14 BANII GAGCC'C 15369 256 439
15 BANII GGGCC'C 16396 1027 473
16 BANII GAGCT'C 16670 274 537
17 BANII GAGCC'C 17852 1182 568
18 BANII GAGCT'C 18138 286 787
19 BANII GAGCC'C 18931 793 790
20 BANII GGGCT'C 19499 568 793
21 BANII GAGCT'C 19938 439 1027
22 BANII GAGCT'C 26308 6370 1052
23 BANII GAGCT'C 27095 787 1096
24 BANII GGGCT'C 29576 2481 1182
25 BANII GGGCT'C 29811 235 1280
26 BANII GAGCT'C 32038 2227 1552
27 BANII GAGCC'C 32473 435 2227
28 BANII GAGCT'C 32744 271 2405
29 BANII GAGCC'C 36255 3511 2481
30 BANII GGGCC'C 37307 1052 2687
31 BANII GGGCT'C 37346 39 2857
32 BANII GAGCC'C 37466 120 3313
33 BANII GAGCT'C 37547 81 3511
2405 6370
Matches found= 169
Name Sequence Position Fragment lengths
1 BBVI 'CGTTTCCATGGAGCTGC 9 8 3
2 BBVI GCAGCGTGTCGCC' 132 123 3
3 BBVI 'GTCCATAAGGCCGCTGC 243 111 3
4 BBVI GCAGCTGATCGCC' 435 192 3
5 BBVI GCAGCAATTACAA' 922 487 3
6 BBVI GCAGCTGTCAAGC' 1444 522 3
7 BBVI GCAGCCAAGGCAG' 1462 18 3
8 BBVI GCAGCAGAACAAC' 1471 9 3
9 BBVI 'CAGTCAGATCTGGCTGC 1650 179 3
10 BBVI GCAGCCTTTAGTG' 1947 297 3
11 BBVI GCAGCCGCTTATT' 2366 419 3
12 BBVI 'TTTTAAGAGTGTGCTGC 2929 563 3
13 BBVI GCAGCAGGACATC' 3616 687 4
14 BBVI 'TTGGGTCTCTCAGCTGC 3895 279 4
15 BBVI GCAGCGGAGGTGC' 4203 308 6
16 BBVI 'AAGAAGGGAGTTGCTGC 4417 214 6
17 BBVI 'AATAAGAGCGTTGCTGC 4586 169 6
18 BBVI 'TGTTGTCGTCTTGCTGC 5333 747 6
19 BBVI GCAGCGGCTGTGG' 5876 543 6
20 BBVI 'TACCACCATCCAGCTGC 5882 6 8
21 BBVI 'CACCATCCAGCTGCTGC 5885 3 9
22 BBVI 'TTAGAATCAAACGCTGC 6193 308 11
23 BBVI 'ACCATCGTACAGGCTGC 6687 494 18
24 BBVI 'AAACAAAGAAACGCTGC 6746 59 19
25 BBVI GCAGCAGGATCAA' 6887 141 21
26 BBVI GCAGCTTATTTTC' 6988 101 25
27 BBVI GCAGCGTTTTGTA' 7688 700 28
28 BBVI GCAGCCAGTGTTC' 7873 185 28
29 BBVI GCAGCGGTTTAGT' 8195 322 30
30 BBVI 'GCATCAGCATCAGCTGC 8404 209 31
31 BBVI 'ACACTCAAGTAGGCTGC 8615 211 34
32 BBVI GCAGCATTCAAAT' 8643 28 34
33 BBVI 'GGATTCTTGTGTGCTGC 8683 40 35
34 BBVI GCAGCAACCGTCT' 8820 137 40
35 BBVI GCAGCATGTAAAA' 8993 173 42
36 BBVI GCAGCCCAACATT' 9012 19 42
37 BBVI GCAGCATTTAAAT' 9091 79 43
38 BBVI 'ACCACTAGGCTGGCTGC 9614 523 44
39 BBVI 'CTCTCTGCTCAGGCTGC 9714 100 44
40 BBVI 'CGCTGAGGTCAAGCTGC 9863 149 45
41 BBVI 'TTCTTTGTTTACGCTGC 10290 427 45
42 BBVI GCAGCTCCTCCTG' 10588 298 46
43 BBVI GCAGCAGCGGTTG' 11624 1036 52
44 BBVI GCAGCGGTTGTGG' 11627 3 54
45 BBVI 'CACCACCATCCAGCTGC 11633 6 55
46 BBVI 'GATGAGATAGTAGCTGC 12280 647 58
47 BBVI 'GAGATAGTAGCTGCTGC 12283 3 59
48 BBVI GCAGCCAACATCC' 12317 34 62
49 BBVI 'CTTCATCGAAGGGCTGC 12321 4 67
50 BBVI 'GATTCCCATGGAGCTGC 12388 67 67
51 BBVI GCAGCGTGTCGCC' 12511 123 67
52 BBVI 'GTCCATAAGGCCGCTGC 12622 111 70
53 BBVI GCAGCTGATCGCC' 12814 192 71
54 BBVI GCAGCAGACCTGT' 12909 95 78
55 BBVI GCAGCTGTTAATG' 13446 537 79
56 BBVI GCAGCAAACTAAC' 13557 111 81
57 BBVI 'CGCCTGTCCCCCGCTGC 14325 768 85
58 BBVI 'CCGTTGACCTCTGCTGC 14403 78 90
59 BBVI 'CTGGGACGTCGTGCTGC 14448 45 92
60 BBVI 'GGGATTTGTTGTGCTGC 14963 515 93
61 BBVI GCAGCTTGTTTTT' 15056 93 95
62 BBVI GCAGCAGGAGATC' 15081 25 97
63 BBVI GCAGCGACGTCTA' 15241 160 100
64 BBVI 'TGACAAGGTGGGGCTGC 15262 21 100
65 BBVI GCAGCACTTTCCG' 16111 849 101
66 BBVI 'ATTAGCATCTTTGCTGC 16329 218 103
67 BBVI GCAGCATTCTAGC' 16647 318 103
68 BBVI GCAGCAGCAGCAG' 16658 11 111
69 BBVI GCAGCAGCAGCGC' 16661 3 111
70 BBVI GCAGCAGCGCACG' 16664 3 111
71 BBVI GCAGCGCACGTGA' 16667 3 111
72 BBVI GCAGCAGGCGGAC' 17187 520 113
73 BBVI GCAGCGGCTGTGG' 17546 359 117
74 BBVI 'TACCACCATCCAGCTGC 17552 6 121
75 BBVI 'CACCATCCAGCTGCTGC 17555 3 123
76 BBVI 'AAGGAGGCCTTTGCTGC 17685 130 123
77 BBVI 'ACCATCGTACAGGCTGC 18204 519 123
78 BBVI GCAGCAGCAGAAA' 19067 863 124
79 BBVI GCAGCAGAAAGCA' 19070 3 130
80 BBVI 'AGGAGTCCAGACGCTGC 19122 52 130
81 BBVI 'GTTCTTTAAAGTGCTGC 19442 320 137
82 BBVI GCAGCCGGTCTTC' 19539 97 141
83 BBVI 'ACCACTAGGCTGGCTGC 20120 581 149
84 BBVI 'CTCTCTGCTCAGGCTGC 20220 100 149
85 BBVI 'CGCTGAGATCAAGCTGC 20369 149 155
86 BBVI 'ACCTTTTACAGGGCTGC 20461 92 156
87 BBVI 'TACTTTGCTTACGCTGC 20779 318 156
88 BBVI 'AAGGCCAAAATGGCTGC 21636 857 160
89 BBVI GCAGCAGCGGTTG' 21943 307 164
90 BBVI GCAGCGGTTGTGG' 21946 3 167
91 BBVI 'CACCACCATCCAGCTGC 21952 6 168
92 BBVI 'ATGTGTTTTATTGCTGC 22108 156 169
93 BBVI 'ACCCACCACTGAGCTGC 22276 168 172
94 BBVI 'CAGACAAATGTAGCTGC 22379 103 173
95 BBVI GCAGCGTGGGCGC' 22590 211 179
96 BBVI 'AGATAGTAGCTTGCTGC 22970 380 182
97 BBVI GCAGCCAACATCC' 23004 34 185
98 BBVI 'CTTCATCGAAGGGCTGC 23008 4 185
99 BBVI 'GATTCCCATGGAGCTGC 23075 67 192
100 BBVI GCAGCGTGTCGCC' 23198 123 192
101 BBVI 'GTCCATAAGGCCGCTGC 23309 111 192
102 BBVI GCAGCTGATCGCC' 23501 192 199
103 BBVI 'CCAACCTTTACTGCTGC 23703 202 202
104 BBVI 'GATTATTTATGCGCTGC 23788 85 208
105 BBVI GCAGCTCTAATGT' 24287 499 209
106 BBVI 'CTCGTGCAGACAGCTGC 24569 282 211
107 BBVI GCAGCATCTCGTG' 24575 6 211
108 BBVI GCAGCGCTTTCCA' 24960 385 214
109 BBVI 'TCTCAAAGGCCAGCTGC 25189 229 218
110 BBVI GCAGCGTCTCAAC' 25292 103 227
111 BBVI 'CGGGGTGCGTTTGCTGC 25464 172 229
112 BBVI 'TAAAGTACGCCAGCTGC 25507 43 241
113 BBVI GCAGCTTTTTCTG' 25565 58 259
114 BBVI 'ACGGCCGATGTCGCTGC 25721 156 279
115 BBVI 'CGTACGGCGCGTGCTGC 25948 227 282
116 BBVI 'ACTCCCGTGTGAGCTGC 26133 185 282
117 BBVI GCAGCCGGCTGGA' 26204 71 297
118 BBVI 'GAGTGGAGTAAGGCTGC 26248 44 298
119 BBVI 'TATGGTGAACAGGCTGC 26279 31 299
120 BBVI 'TCACGTAGCTCAGCTGC 26599 320 307
121 BBVI 'CTACATTAATGAGCTGC 26680 81 308
122 BBVI GCAGCTGTGATGT' 26962 282 308
123 BBVI GCAGCATATGCCA' 27434 472 315
124 BBVI 'CAGCTGAGAGGGGCTGC 27524 90 318
125 BBVI GCAGCGTCTAACC' 27568 44 318
126 BBVI GCAGCTCTTTTCC' 27723 155 320
127 BBVI GCAGCCTCTTTTA' 28160 437 320
128 BBVI GCAGCCCACATTA' 28948 788 322
129 BBVI GCAGCTATATCTT' 29078 130 322
130 BBVI 'CAGTTCATGCATGCTGC 29614 536 354
131 BBVI GCAGCTCCTGGTC' 30508 894 359
132 BBVI GCAGCGTCGATCT' 30629 121 380
133 BBVI 'ACACATTTAAATGCTGC 30683 54 385
134 BBVI GCAGCATTTTGAT' 30718 35 406
135 BBVI GCAGCAGCAGCTC' 31371 653 407
136 BBVI GCAGCAGCTCATT' 31374 3 419
137 BBVI GCAGCTCATTAGA' 31377 3 427
138 BBVI GCAGCTGTAAATA' 31419 42 437
139 BBVI 'GTGAAAATGCATGCTGC 31964 545 437
140 BBVI 'AGAGGTCTGATGGCTGC 32370 406 472
141 BBVI 'GGTCTGATGGCTGCTGC 32373 3 475
142 BBVI GCAGCAAAGTCTG' 32401 28 487
143 BBVI 'AAAAAGCAGGAAGCTGC 32583 182 494
144 BBVI 'GTGAGCCAGGATGCTGC 32625 42 499
145 BBVI GCAGCTAGAAGAA' 32692 67 515
146 BBVI 'TGAGCTCAAACTGCTGC 32738 46 519
147 BBVI GCAGCGGCTCCCA' 33974 1236 520
148 BBVI 'TTCACACATTTAGCTGC 34141 167 522
149 BBVI 'TTATTCAGTCGCGCTGC 34305 164 523
150 BBVI 'CGTCGTGCTTCAGCTGC 34513 208 536
151 BBVI GCAGCGGAATCTA' 34828 315 537
152 BBVI 'TAGAATTCGTCTGCTGC 35069 241 543
153 BBVI 'ATAAAACGTCCCGCTGC 35131 62 545
154 BBVI GCAGCGATGTCTC' 35453 322 563
155 BBVI 'CAAATTTGTGCGGCTGC 35483 30 581
156 BBVI GCAGCCCTGAGGA' 35958 475 647
157 BBVI GCAGCTCTGTGAC' 36650 692 653
158 BBVI 'CGTCAGGTTGGTGCTGC 36763 113 687
159 BBVI GCAGCCCAGTCCT' 36962 199 692
160 BBVI GCAGCTTCTTGTG' 37221 259 700
161 BBVI GCAGCACAAAGCA' 37276 55 747
162 BBVI GCAGCAGGCAGGC' 37321 45 768
163 BBVI 'CGTCTGCCCGGGGCTGC 37675 354 788
164 BBVI 'TACCACTTCTGCGCTGC 37745 70 823
165 BBVI 'ACTTGGGTACAGGCTGC 38182 437 849
166 BBVI GCAGCTTCTGAAT' 38306 124 857
167 BBVI GCAGCGGAGAGCT' 39129 823 863
168 BBVI GCAGCGCCTAATA' 39428 299 894
169 BBVI 'CTCTGCTGGCTAGCTGC 39545 117 1036
407 1236
Matches found= 17
Name Sequence Position Fragment lengths
1 BCLI T'GATCA 651 650 314
2 BCLI T'GATCA 2499 1848 508
3 BCLI T'GATCA 7845 5346 549
4 BCLI T'GATCA 8604 759 650
5 BCLI T'GATCA 9153 549 759
6 BCLI T'GATCA 9661 508 1056
7 BCLI T'GATCA 12027 2366 1257
8 BCLI T'GATCA 14613 2586 1343
9 BCLI T'GATCA 19111 4498 1848
10 BCLI T'GATCA 20167 1056 2048
11 BCLI T'GATCA 22215 2048 2366
12 BCLI T'GATCA 22529 314 2586
13 BCLI T'GATCA 23872 1343 2790
14 BCLI T'GATCA 26662 2790 2796
15 BCLI T'GATCA 29458 2796 4417
16 BCLI T'GATCA 30715 1257 4498
17 BCLI T'GATCA 35535 4820 4820
4417 5346
Matches found= 11
Name Sequence Position Fragment lengths
1 BGLI GCCACAG'AGGC 10041 10040 49
2 BGLI GCCATTT'CGGC 15384 5343 67
3 BGLI GCCCTTC'AGGC 19996 4612 487
4 BGLI GCCATTG'TGGC 20483 487 768
5 BGLI GCCACAG'AGGC 20532 49 1114
6 BGLI GCCAAAA'TGGC 21646 1114 2502
7 BGLI GCCCACC'AGGC 24826 3180 3180
8 BGLI GCCGTGA'AGGC 25594 768 4576
9 BGLI GCCACAC'TGGC 25661 67 4612
10 BGLI GCCTCTG'GGGC 32874 7213 5343
11 BGLI GCCAGCC'CGGC 37450 4576 7213
2502 10040
Matches found= 12
Name Sequence Position Fragment lengths
1 BGLII A'GATCT 1239 1238 417
2 BGLII A'GATCT 1656 417 1040
3 BGLII A'GATCT 5804 4148 1238
4 BGLII A'GATCT 8477 2673 2058
5 BGLII A'GATCT 14381 5904 2343
6 BGLII A'GATCT 17474 3093 2673
7 BGLII A'GATCT 22161 4687 3093
8 BGLII A'GATCT 26677 4516 3313
9 BGLII A'GATCT 29020 2343 4148
10 BGLII A'GATCT 30060 1040 4516
11 BGLII A'GATCT 34581 4521 4521
12 BGLII A'GATCT 37894 3313 4687
2058 5904
Matches found= 52
Name Sequence Position Fragment lengths
1 BINI 'AAAATGATCC 1979 1978 13
2 BINI 'CTTAAGATCC 2016 37 13
3 BINI 'TACAAGATCC 3760 1744 13
4 BINI 'CTGCTGATCC 3796 36 13
5 BINI 'GAAAGGATCC 5921 2125 13
6 BINI GGATCCGTA' 5934 13 18
7 BINI GGATCGCCA' 6610 676 36
8 BINI GGATCAAAT' 6889 279 36
9 BINI GGATCTGGA' 7370 481 37
10 BINI GGATCAGCT' 7621 251 37
11 BINI 'CAGCAGATCC 8447 826 64
12 BINI 'CATTTGATCC 8791 344 94
13 BINI GGATCAGCA' 9488 697 132
14 BINI 'GAGAAGATCC 12882 3394 160
15 BINI GGATCGCAC' 13422 540 166
16 BINI 'TTAATGATCC 13440 18 211
17 BINI GGATCTGTG' 13477 37 217
18 BINI 'TACAAGATCC 15239 1762 248
19 BINI 'CTGCTGATCC 15275 36 249
20 BINI 'CACTGGATCC 16295 1020 251
21 BINI GGATCCGGG' 16308 13 274
22 BINI GGATCTGGA' 16899 591 279
23 BINI GGATCGCCA' 18127 1228 311
24 BINI GGATCTCAA' 18287 160 312
25 BINI 'AATCAGATCC 19360 1073 314
26 BINI 'TTGCGGATCC 19674 314 344
27 BINI GGATCCAGA' 19687 13 451
28 BINI 'GCAGGGATCC 22394 2707 460
29 BINI GGATCCTCT' 22407 13 481
30 BINI 'GCATCGATCC 24135 1728 540
31 BINI 'AGAGTGATCC 24718 583 548
32 BINI GGATCTAAG' 24992 274 583
33 BINI 'AGTTGGATCC 26049 1057 591
34 BINI GGATCCAAA' 26062 13 676
35 BINI GGATCACCC' 26126 64 697
36 BINI GGATCAATA' 26337 211 826
37 BINI GGATCAGAT' 27412 1075 979
38 BINI GGATCACAA' 29100 1688 1020
39 BINI 'CAATTGATCC 30079 979 1057
40 BINI GGATCATAA' 30173 94 1073
41 BINI 'ATACAGATCC 30484 311 1075
42 BINI 'TGTGTGATCC 30650 166 1228
43 BINI GGATCTCAG' 33297 2647 1688
44 BINI GGATCTGAA' 33609 312 1728
45 BINI GGATCAGCG' 34069 460 1744
46 BINI 'CATGAGATCC 36164 2095 1762
47 BINI GGATCAGTG' 36296 132 1943
48 BINI 'AGGCTGATCC 36513 217 1978
49 BINI GGATCGCGC' 37061 548 2095
50 BINI 'TTAAAGATCC 37512 451 2125
51 BINI 'GCCCAGATCC 37760 248 2647
52 BINI GGATCGACC' 39703 1943 2707
249 3394
Matches found= 14
Name Sequence Position Fragment lengths
1 BSMI GAATGCA' 3140 3139 2
2 BSMI GAATGCT' 5013 1873 461
3 BSMI G'CATTC 5761 748 748
4 BSMI GAATGCA' 6222 461 895
5 BSMI G'CATTC 8634 2412 1474
6 BSMI G'CATTC 11761 3127 1873
7 BSMI GAATGCC' 14132 2371 2371
8 BSMI G'CATTC 16638 2506 2412
9 BSMI GAATGCC' 21480 4842 2506
10 BSMI G'CATTC 22375 895 3056
11 BSMI G'CATTC 30764 8389 3127
12 BSMI GAATGCA' 30766 2 3139
13 BSMI G'CATTC 33822 3056 4656
14 BSMI G'CATTC 38478 4656 4842
1474 8389
Matches found= 71
Name Sequence Position Fragment lengths
1 BSP1286 GAGCT'C 791 790 8
2 BSP1286 GTGCA'C 1674 883 8
3 BSP1286 GTGCA'C 2601 927 9
4 BSP1286 GTGCA'C 2609 8 11
5 BSP1286 GAGCA'C 2907 298 14
6 BSP1286 GAGCT'C 3648 741 17
7 BSP1286 GGGCA'C 4053 405 36
8 BSP1286 GTGCT'C 4845 792 39
9 BSP1286 GTGCA'C 6055 1210 51
10 BSP1286 GTGCA'C 6063 8 54
11 BSP1286 GAGCC'C 6335 272 54
12 BSP1286 GAGCT'C 6621 286 64
13 BSP1286 GAGCC'C 6842 221 64
14 BSP1286 GAGCT'C 6851 9 81
15 BSP1286 GAGCC'C 7388 537 84
16 BSP1286 GGGCT'C 8668 1280 100
17 BSP1286 GGGCA'C 9386 718 102
18 BSP1286 GGGCA'C 9778 392 118
19 BSP1286 GTGCC'C 9842 64 120
20 BSP1286 GTGCA'C 11012 1170 148
21 BSP1286 GAGCA'C 11635 623 221
22 BSP1286 GAGCT'C 11981 346 235
23 BSP1286 GTGCT'C 12129 148 244
24 BSP1286 GGGCT'C 13533 1404 256
25 BSP1286 GAGCC'C 14006 473 271
26 BSP1286 GGGCC'C 14017 11 272
27 BSP1286 GAGCT'C 15113 1096 282
28 BSP1286 GAGCC'C 15369 256 286
29 BSP1286 GTGCA'C 16152 783 286
30 BSP1286 GGGCC'C 16396 244 292
31 BSP1286 GGGCA'C 16450 54 298
32 BSP1286 GTGCT'C 16568 118 308
33 BSP1286 GAGCT'C 16670 102 346
34 BSP1286 GAGCC'C 17852 1182 359
35 BSP1286 GAGCT'C 18138 286 392
36 BSP1286 GAGCC'C 18931 793 405
37 BSP1286 GGGCT'C 19499 568 435
38 BSP1286 GAGCT'C 19938 439 439
39 BSP1286 GTGCC'C 19992 54 446
40 BSP1286 GGGCA'C 20284 292 473
41 BSP1286 GTGCC'C 20348 64 486
42 BSP1286 GAGCA'C 20926 578 537
43 BSP1286 GAGCA'C 21954 1028 563
44 BSP1286 GAGCA'C 23692 1738 568
45 BSP1286 GTGCT'C 24537 845 578
46 BSP1286 GTGCA'C 25326 789 623
47 BSP1286 GAGCT'C 26308 982 673
48 BSP1286 GAGCA'C 26408 100 718
49 BSP1286 GGGCA'C 27081 673 741
50 BSP1286 GAGCT'C 27095 14 747
51 BSP1286 GGGCT'C 29576 2481 783
52 BSP1286 GGGCT'C 29811 235 789
53 BSP1286 GAGCT'C 32038 2227 790
54 BSP1286 GAGCC'C 32473 435 792
55 BSP1286 GAGCT'C 32744 271 793
56 BSP1286 GAGCA'C 32795 51 845
57 BSP1286 GAGCA'C 32812 17 883
58 BSP1286 GTGCT'C 34077 1265 893
59 BSP1286 GAGCA'C 35508 1431 927
60 BSP1286 GAGCC'C 36255 747 982
61 BSP1286 GTGCT'C 36701 446 1028
62 BSP1286 GAGCA'C 37187 486 1096
63 BSP1286 GTGCA'C 37223 36 1170
64 BSP1286 GGGCC'C 37307 84 1182
65 BSP1286 GGGCT'C 37346 39 1210
66 BSP1286 GAGCC'C 37466 120 1265
67 BSP1286 GAGCT'C 37547 81 1280
68 BSP1286 GTGCA'C 38110 563 1404
69 BSP1286 GTGCA'C 38469 359 1431
70 BSP1286 GTGCT'C 38751 282 1738
71 BSP1286 GAGCA'C 39059 308 2227
893 2481
Matches found= 28
Name Sequence Position Fragment lengths
1 BSPMI 'TGAACTTGGCAGGT 878 877 14
2 BSPMI 'ATTACAGAGCAGGT 1780 902 190
3 BSPMI 'GCCTCTCAGCAGGT 3344 1564 197
4 BSPMI ACCTGCAGAT' 3534 190 214
5 BSPMI 'GAGTGGGAGCAGGT 4316 782 373
6 BSPMI 'GTGACCATGCAGGT 7241 2925 558
7 BSPMI 'ATGTTTCTGCAGGT 8072 831 624
8 BSPMI ACCTGCTACC' 8966 894 782
9 BSPMI 'GCCTACATGCAGGT 14985 6019 831
10 BSPMI ACCTGCGGGA' 15934 949 877
11 BSPMI 'GTGACCATGCAGGT 18764 2830 894
12 BSPMI 'TTTTTATTGCAGGT 19658 894 894
13 BSPMI 'GCTCATTGGCAGGT 22505 2847 902
14 BSPMI ACCTGCATTT' 23744 1239 949
15 BSPMI 'GACAACCTGCAGGT 25604 1860 1102
16 BSPMI ACCTGCAGGT' 25618 14 1202
17 BSPMI 'GGTACTTTGCAGGT 27215 1597 1223
18 BSPMI ACCTGCTTCC' 28438 1223 1239
19 BSPMI 'GCTCAAGAGCAGGT 28635 197 1241
20 BSPMI ACCTGCATAA' 30162 1527 1527
21 BSPMI 'AGCAAACAGCAGGT 30720 558 1564
22 BSPMI ACCTGCTTGG' 31344 624 1597
23 BSPMI ACCTGCTTCA' 32446 1102 1833
24 BSPMI 'TAAATAAGGCAGGT 33687 1241 1860
25 BSPMI 'GGATCAGCGCAGGT 34060 373 2643
26 BSPMI ACCTGCATGT' 35893 1833 2830
27 BSPMI ACCTGCACGT' 37095 1202 2847
28 BSPMI ACCTGCAGAA' 39738 2643 2925
214 6019
Matches found= 2
Name Sequence Position Fragment lengths
1 BSPMII TCCGG'A 19876 19875 5127
2 BSPMII TCCGG'A 25003 5127 14949
14949 19875
Matches found= 3
Name Sequence Position Fragment lengths
1 BSSHII G'CGCGC 16376 16375 3523
2 BSSHII G'CGCGC 28923 12547 7506
3 BSSHII G'CGCGC 36429 7506 12547
3523 16375
Matches found= 10
Name Sequence Position Fragment lengths
1 BSTEII G'GTCACC 459 458 12
2 BSTEII G'GTCACC 2649 2190 458
3 BSTEII G'GTGACC 7241 4592 2190
4 BSTEII G'GTCACC 12838 5597 2404
5 BSTEII G'GTGACC 18764 5926 3204
6 BSTEII G'GTGACC 18776 12 4033
7 BSTEII G'GTCACC 23525 4749 4592
8 BSTEII G'GTCACC 25929 2404 4749
9 BSTEII G'GTCACC 32715 6786 5597
10 BSTEII G'GTGACC 35919 3204 5926
4033 6786
Matches found= 27
Name Sequence Position Fragment lengths
1 BSTXI CCAAACAG'ATGG 471 470 18
2 BSTXI CCAGTTTA'ATGG 542 71 33
3 BSTXI CCATCACA'TTGG 2378 1836 71
4 BSTXI CCAATGTC'ATGG 3051 673 104
5 BSTXI CCAATAAC'ATGG 3155 104 290
6 BSTXI CCATCATA'GTGG 3188 33 339
7 BSTXI CCATTGCT'TTGG 5853 2665 377
8 BSTXI CCATCGCT'GTGG 8583 2730 445
9 BSTXI CCACTAGG'CTGG 9623 1040 470
10 BSTXI CCAAACAG'ATGG 12850 3227 505
11 BSTXI CCATTACT'CTGG 14025 1175 549
12 BSTXI CCATTGCT'TTGG 17523 3498 625
13 BSTXI CCACCATC'GTGG 18638 1115 649
14 BSTXI CCACTAGG'CTGG 20129 1491 673
15 BSTXI CCATGGCC'GTGG 21600 1471 1040
16 BSTXI CCAAACAG'ATGG 23537 1937 1115
17 BSTXI CCAGTAAG'ATGG 24162 625 1175
18 BSTXI CCAGAACT'GTGG 24811 649 1471
19 BSTXI CCACCAGG'CTGG 24829 18 1491
20 BSTXI CCAGCTGC'ATGG 25206 377 1836
21 BSTXI CCATACCT'CTGG 25496 290 1937
22 BSTXI CCAGCACC'ATGG 25941 445 1956
23 BSTXI CCAGACAT'ATGG 26280 339 2665
24 BSTXI CCATCAAA'ATGG 26829 549 2730
25 BSTXI CCAAAGCT'TTGG 32727 5898 3227
26 BSTXI CCATCAAT'ATGG 33232 505 3498
27 BSTXI CCAAACTG'CTGG 35188 1956 4764
4764 5898
Matches found= 117
Name Sequence Position Fragment lengths
1 BSTNI CC'TGG 172 171 5
2 BSTNI CC'AGG 283 111 5
3 BSTNI CC'AGG 307 24 5
4 BSTNI CC'AGG 312 5 9
5 BSTNI CC'AGG 388 76 9
6 BSTNI CC'TGG 949 561 9
7 BSTNI CC'TGG 2027 1078 12
8 BSTNI CC'AGG 2740 713 13
9 BSTNI CC'TGG 3167 427 15
10 BSTNI CC'AGG 3247 80 15
11 BSTNI CC'TGG 3744 497 16
12 BSTNI CC'AGG 3770 26 18
13 BSTNI CC'AGG 3806 36 20
14 BSTNI CC'TGG 3869 63 24
15 BSTNI CC'TGG 3878 9 24
16 BSTNI CC'TGG 4004 126 24
17 BSTNI CC'TGG 4391 387 26
18 BSTNI CC'AGG 5300 909 27
19 BSTNI CC'AGG 6007 707 27
20 BSTNI CC'AGG 6328 321 27
21 BSTNI CC'AGG 7013 685 27
22 BSTNI CC'TGG 7239 226 30
23 BSTNI CC'TGG 7321 82 30
24 BSTNI CC'TGG 7389 68 36
25 BSTNI CC'AGG 7611 222 36
26 BSTNI CC'TGG 8801 1190 39
27 BSTNI CC'TGG 8888 87 40
28 BSTNI CC'AGG 9216 328 40
29 BSTNI CC'TGG 9742 526 47
30 BSTNI CC'TGG 9772 30 57
31 BSTNI CC'TGG 9829 57 57
32 BSTNI CC'TGG 9847 18 63
33 BSTNI CC'TGG 10326 479 68
34 BSTNI CC'AGG 11485 1159 72
35 BSTNI CC'TGG 11905 420 74
36 BSTNI CC'AGG 11945 40 76
37 BSTNI CC'AGG 12206 261 76
38 BSTNI CC'TGG 12233 27 76
39 BSTNI CC'TGG 12551 318 76
40 BSTNI CC'AGG 12662 111 78
41 BSTNI CC'AGG 12686 24 80
42 BSTNI CC'AGG 12691 5 82
43 BSTNI CC'AGG 12767 76 86
44 BSTNI CC'TGG 14360 1593 87
45 BSTNI CC'AGG 14373 13 111
46 BSTNI CC'AGG 14388 15 111
47 BSTNI CC'TGG 14792 404 111
48 BSTNI CC'AGG 14866 74 112
49 BSTNI CC'AGG 15028 162 121
50 BSTNI CC'AGG 15249 221 126
51 BSTNI CC'AGG 15285 36 131
52 BSTNI CC'TGG 15357 72 150
53 BSTNI CC'AGG 15846 489 152
54 BSTNI CC'TGG 16390 544 152
55 BSTNI CC'AGG 17845 1455 162
56 BSTNI CC'TGG 18343 498 171
57 BSTNI CC'AGG 18612 269 192
58 BSTNI CC'TGG 18762 150 193
59 BSTNI CC'AGG 19122 360 204
60 BSTNI CC'TGG 20248 1126 210
61 BSTNI CC'TGG 20278 30 216
62 BSTNI CC'TGG 20335 57 221
63 BSTNI CC'AGG 20768 433 222
64 BSTNI CC'TGG 20815 47 224
65 BSTNI CC'AGG 21008 193 226
66 BSTNI CC'AGG 21564 556 233
67 BSTNI CC'AGG 21804 240 240
68 BSTNI CC'AGG 21882 78 252
69 BSTNI CC'AGG 22892 1010 255
70 BSTNI CC'TGG 22919 27 261
71 BSTNI CC'TGG 23238 319 269
72 BSTNI CC'AGG 23349 111 271
73 BSTNI CC'AGG 23373 24 307
74 BSTNI CC'AGG 23378 5 318
75 BSTNI CC'AGG 23454 76 319
76 BSTNI CC'AGG 24558 1104 321
77 BSTNI CC'AGG 24634 76 324
78 BSTNI CC'AGG 24826 192 328
79 BSTNI CC'TGG 25161 335 335
80 BSTNI CC'TGG 25416 255 338
81 BSTNI CC'TGG 25626 210 358
82 BSTNI CC'AGG 26310 684 360
83 BSTNI CC'TGG 26617 307 387
84 BSTNI CC'TGG 27335 718 404
85 BSTNI CC'AGG 27456 121 405
86 BSTNI CC'TGG 27680 224 420
87 BSTNI CC'TGG 28321 641 427
88 BSTNI CC'TGG 30031 1710 433
89 BSTNI CC'TGG 30302 271 437
90 BSTNI CC'AGG 30311 9 479
91 BSTNI CC'TGG 30351 40 489
92 BSTNI CC'TGG 30503 152 497
93 BSTNI CC'AGG 30908 405 498
94 BSTNI CC'TGG 31443 535 526
95 BSTNI CC'AGG 31999 556 535
96 BSTNI CC'AGG 32623 624 544
97 BSTNI CC'AGG 32632 9 556
98 BSTNI CC'AGG 32836 204 556
99 BSTNI CC'TGG 32988 152 561
100 BSTNI CC'AGG 35895 2907 624
101 BSTNI CC'AGG 36147 252 641
102 BSTNI CC'AGG 36174 27 684
103 BSTNI CC'AGG 36286 112 685
104 BSTNI CC'AGG 36313 27 707
105 BSTNI CC'TGG 36651 338 713
106 BSTNI CC'TGG 36867 216 718
107 BSTNI CC'AGG 36998 131 909
108 BSTNI CC'TGG 37010 12 1010
109 BSTNI CC'TGG 37030 20 1078
110 BSTNI CC'TGG 37467 437 1104
111 BSTNI CC'TGG 37506 39 1126
112 BSTNI CC'AGG 37522 16 1159
113 BSTNI CC'TGG 38936 1414 1190
114 BSTNI CC'AGG 39294 358 1414
115 BSTNI CC'TGG 39527 233 1455
116 BSTNI CC'AGG 39542 15 1593
117 BSTNI CC'AGG 39628 86 1710
324 2907
Matches found= 9
Name Sequence Position Fragment lengths
1 CLAI AT'CGAT 730 729 366
2 CLAI AT'CGAT 12387 11657 729
3 CLAI AT'CGAT 13755 1368 1065
4 CLAI AT'CGAT 16278 2523 1368
5 CLAI AT'CGAT 19250 2972 2523
6 CLAI AT'CGAT 23074 3824 2972
7 CLAI AT'CGAT 24139 1065 3218
8 CLAI AT'CGAT 24505 366 3824
9 CLAI AT'CGAT 36734 12229 11657
3218 12229
Matches found= 38
Name Sequence Position Fragment lengths
1 DRAI TTT'AAA 1038 1037 19
2 DRAI TTT'AAA 2057 1019 56
3 DRAI TTT'AAA 4988 2931 74
4 DRAI TTT'AAA 6139 1151 102
5 DRAI TTT'AAA 7052 913 107
6 DRAI TTT'AAA 7071 19 167
7 DRAI TTT'AAA 7783 712 170
8 DRAI TTT'AAA 9013 1230 208
9 DRAI TTT'AAA 9087 74 255
10 DRAI TTT'AAA 9395 308 308
11 DRAI TTT'AAA 9502 107 338
12 DRAI TTT'AAA 11438 1936 354
13 DRAI TTT'AAA 13706 2268 358
14 DRAI TTT'AAA 14744 1038 409
15 DRAI TTT'AAA 19449 4705 439
16 DRAI TTT'AAA 22625 3176 443
17 DRAI TTT'AAA 22681 56 516
18 DRAI TTT'AAA 24022 1341 650
19 DRAI TTT'AAA 24230 208 712
20 DRAI TTT'AAA 25508 1278 913
21 DRAI TTT'AAA 25846 338 913
22 DRAI TTT'AAA 27181 1335 1019
23 DRAI TTT'AAA 28275 1094 1037
24 DRAI TTT'AAA 28377 102 1038
25 DRAI TTT'AAA 28632 255 1094
26 DRAI TTT'AAA 29148 516 1151
27 DRAI TTT'AAA 29318 170 1229
28 DRAI TTT'AAA 29761 443 1230
29 DRAI TTT'AAA 29928 167 1278
30 DRAI TTT'AAA 30337 409 1335
31 DRAI TTT'AAA 30691 354 1341
32 DRAI TTT'AAA 31604 913 1458
33 DRAI TTT'AAA 32254 650 1936
34 DRAI TTT'AAA 34444 2190 2024
35 DRAI TTT'AAA 35673 1229 2190
36 DRAI TTT'AAA 37697 2024 2268
37 DRAI TTT'AAA 38136 439 2931
38 DRAI TTT'AAA 38494 358 3176
1458 4705
Matches found= 17
Name Sequence Position Fragment lengths
1 DRAII AG'GTCCC 696 695 77
2 DRAII GG'GTCCC 1696 1000 262
3 DRAII AG'GACCT 9569 7873 265
4 DRAII GG'GGCCT 10567 998 695
5 DRAII GG'GCCCC 14014 3447 720
6 DRAII AG'GCCCT 14760 746 746
7 DRAII GG'GTCCT 16131 1371 948
8 DRAII GG'GCCCT 16393 262 998
9 DRAII AG'GACCC 18266 1873 1000
10 DRAII GG'GTCCT 18986 720 1012
11 DRAII AG'GCCCC 19998 1012 1371
12 DRAII AG'GACCT 20075 77 1701
13 DRAII AG'GGCCT 25351 5276 1873
14 DRAII AG'GTCCT 25616 265 3447
15 DRAII AG'GTCCT 33352 7736 3951
16 DRAII GG'GGCCC 37303 3951 5276
17 DRAII AG'GACCC 38251 948 7736
1701 7873
Matches found= 7
Name Sequence Position Fragment lengths
1 DRAIII CACCAC'GTG 1015 1014 180
2 DRAIII CACAGA'GTG 3666 2651 1014
3 DRAIII CACTTT'GTG 17104 13438 1595
4 DRAIII CACTTC'GTG 17284 180 2651
5 DRAIII CACAAT'GTG 18879 1595 3144
6 DRAIII CACAAT'GTG 22023 3144 6564
7 DRAIII CACAAA'GTG 28587 6564 11365
11365 13438
Matches found= 41
Name Sequence Position Fragment lengths
1 EAEI T'GGCCA 2669 2668 9
2 EAEI C'GGCCG 3552 883 18
3 EAEI T'GGCCA 3879 327 21
4 EAEI T'GGCCA 4235 356 24
5 EAEI C'GGCCA 4440 205 66
6 EAEI C'GGCCG 6375 1935 70
7 EAEI T'GGCCG 7811 1436 148
8 EAEI T'GGCCG 8802 991 205
9 EAEI T'GGCCG 9830 1028 269
10 EAEI T'GGCCG 9854 24 305
11 EAEI T'GGCCG 9920 66 309
12 EAEI C'GGCCA 11363 1443 317
13 EAEI T'GGCCA 13295 1932 327
14 EAEI C'GGCCG 13761 466 336
15 EAEI C'GGCCA 14066 305 356
16 EAEI T'GGCCA 14484 418 377
17 EAEI T'GGCCG 14981 497 393
18 EAEI T'GGCCG 15358 377 418
19 EAEI T'GGCCA 15376 18 438
20 EAEI C'GGCCG 15385 9 458
21 EAEI T'GGCCG 17454 2069 466
22 EAEI C'GGCCG 17892 438 497
23 EAEI T'GGCCG 19833 1941 503
24 EAEI T'GGCCG 20336 503 700
25 EAEI C'GGCCG 20357 21 791
26 EAEI T'GGCCG 21596 1239 883
27 EAEI C'GGCCA 25169 3573 991
28 EAEI T'GGCCG 25317 148 1000
29 EAEI C'GGCCA 25653 336 1028
30 EAEI C'GGCCG 25723 70 1239
31 EAEI C'GGCCA 26514 791 1249
32 EAEI T'GGCCA 26831 317 1436
33 EAEI C'GGCCA 30747 3916 1443
34 EAEI C'GGCCA 31447 700 1550
35 EAEI T'GGCCA 32696 1249 1932
36 EAEI C'GGCCA 33005 309 1935
37 EAEI T'GGCCA 36282 3277 1941
38 EAEI T'GGCCG 36675 393 2069
39 EAEI T'GGCCG 38225 1550 2668
40 EAEI T'GGCCA 39225 1000 3277
41 EAEI C'GGCCA 39683 458 3573
269 3916
Matches found= 6
Name Sequence Position Fragment lengths
1 ECOB 'AGCAATTACAAGTCA 911 910 910
2 ECOB 'TGAGGTCAAGCTGCT 9866 8955 2633
3 ECOB 'AGCAGACCTGTATCA 12898 3032 3032
4 ECOB 'TGAGATCAAGCTGCT 20372 7474 7214
5 ECOB 'TGAAATATTTATGCT 30105 9733 7474
6 ECOB 'TGAGCTCAAACTGCT 32738 2633 8955
7214 9733
Matches found= 9
Name Sequence Position Fragment lengths
1 ECORI G'AATTC 3573 3572 1598
2 ECORI G'AATTC 16859 13286 1865
3 ECORI G'AATTC 19713 2854 1902
4 ECORI G'AATTC 24303 4590 1923
5 ECORI G'AATTC 25901 1598 2854
6 ECORI G'AATTC 27766 1865 3481
7 ECORI G'AATTC 29689 1923 3572
8 ECORI G'AATTC 31591 1902 4590
9 ECORI G'AATTC 35072 3481 4880
4880 13286
Matches found= 4
Name Sequence Position Fragment lengths
1 ECORV GAT'ATC 4379 4378 2494
2 ECORV GAT'ATC 28599 24220 3919
3 ECORV GAT'ATC 31093 2494 4378
4 ECORV GAT'ATC 36033 4940 4940
3919 24220
Matches found= 9
Name Sequence Position Fragment lengths
1 ESPI GC'TGAGC 6580 6579 42
2 ESPI GC'TGAGC 11949 5369 133
3 ESPI GC'TCAGC 16839 4890 1258
4 ESPI GC'TGAGC 18097 1258 3399
5 ESPI GC'TTAGC 21496 3399 4890
6 ESPI GC'TCAGC 26608 5112 5112
7 ESPI GC'TGAGC 32806 6198 5369
8 ESPI GC'TCAGC 32848 42 6198
9 ESPI GC'TCAGC 39819 6971 6579
133 6971
Matches found= 101
Name Sequence Position Fragment lengths
1 FOKI 'TAGCCCGAGCCATCATCC 133 132 4
2 FOKI 'ACCGTCTGTCCACCATCC 343 210 4
3 FOKI 'GTCTTCTGGGACTCATCC 1859 1516 6
4 FOKI GGATGACGCCTCTC' 1910 51 7
5 FOKI 'TGACTGACAGCTTCATCC 2722 812 7
6 FOKI 'GTACCATAATCCTCATCC 3308 586 11
7 FOKI 'AGCTCACCCTGGTCATCC 3860 552 12
8 FOKI GGATGGAAGCTCAC' 3867 7 13
9 FOKI 'ATTTGGGCACCCCCATCC 4044 177 15
10 FOKI GGATGCGAGGGACA' 4409 365 15
11 FOKI 'TTGTATTCCAGAACATCC 5669 1260 18
12 FOKI 'AAAGTATGTTCACCATCC 5716 47 18
13 FOKI 'GACTCACCTCTCTCATCC 5783 67 21
14 FOKI 'GTAAAAGTACCACCATCC 5875 92 31
15 FOKI 'TCGACGGTCACGACATCC 6262 387 47
16 FOKI 'TCCGCTCCCTCAACATCC 6277 15 51
17 FOKI 'CCAGCTTCTAATTCATCC 6995 718 51
18 FOKI 'TAGTCAGAACGTCCATCC 7303 308 57
19 FOKI GGATGAGAACGTTC' 7766 463 57
20 FOKI 'AGCATCAGCTGCACATCC 8409 643 63
21 FOKI GGATGAATAATAAG' 9430 1021 66
22 FOKI GGATGCCCCTCTCT' 9720 290 67
23 FOKI 'AGCTGACCCTGCTCATCC 9811 91 70
24 FOKI 'TGGCCGTGGTGCCCATCC 9829 18 91
25 FOKI GGATGTGAGATGAG' 9984 155 91
26 FOKI GGATGGATGTGGAG' 10359 375 92
27 FOKI GGATGTGGAGGGAG' 10363 4 117
28 FOKI 'ACAGCAGAGCAGACATCC 10429 66 124
29 FOKI 'TCCTCCTGCACAACATCC 10580 151 132
30 FOKI 'AATGAGTGGCTTGCATCC 11043 463 134
31 FOKI GGATGGATATAATA' 11216 173 144
32 FOKI 'GAAAGAGCACCACCATCC 11626 410 151
33 FOKI 'AGCATCTGTGGGACATCC 11915 289 155
34 FOKI GGATGAGATAGTAG' 12293 378 157
35 FOKI 'CTAAAGCAGCCAACATCC 12299 6 162
36 FOKI 'TAGCCCGAGCCATCATCC 12512 213 165
37 FOKI 'ACCGTCTGTCCACCATCC 12722 210 173
38 FOKI GGATGATCGGACGG' 12879 157 177
39 FOKI 'ACGTCACCCTCAGCATCC 12996 117 179
40 FOKI 'TCAACAATGGCAACATCC 14078 1082 181
41 FOKI 'GCCAGGTGAAACGCATCC 15025 947 188
42 FOKI 'AACTGACGCTGGTCATCC 15339 314 204
43 FOKI GGATGAAGAAACCC' 15811 472 210
44 FOKI 'GTGAACGACATGACATCC 15824 13 210
45 FOKI 'ACGACATGACATCCATCC 15828 4 210
46 FOKI 'ACGGGAGTACGCTCATCC 16032 204 213
47 FOKI 'AGACCTCTCCGAACATCC 16211 179 213
48 FOKI GGATGTGGAGGAAT' 16862 651 214
49 FOKI GGATGTTATAAGAA' 17223 361 220
50 FOKI 'TCGAGTTCAAGAACATCC 17357 134 234
51 FOKI 'GCAAAAGTACCACCATCC 17545 188 236
52 FOKI 'TCGACGGTCACGACATCC 17779 234 243
53 FOKI 'TCCGCTCCCTCAACATCC 17794 15 244
54 FOKI 'AATTCTTTAATCGCATCC 18563 769 263
55 FOKI 'TTAAAGTAATATTCATCC 19086 523 272
56 FOKI 'GATGGTTATTACACATCC 19251 165 273
57 FOKI GGATGAAGACGTTC' 19432 181 288
58 FOKI 'TGCTGCATCTGAACATCC 19453 21 289
59 FOKI 'CCGAGTGGCCCTACATCC 19471 18 290
60 FOKI 'AGCCGGTCTTCGCCATCC 19528 57 291
61 FOKI GGATGCTCCTCTCT' 20226 698 306
62 FOKI 'AGCTGACCCTGCTCATCC 20317 91 308
63 FOKI 'GTATGACATATGACATCC 20623 306 314
64 FOKI 'GACATCCTAATATCATCC 20634 11 361
65 FOKI GGATGGACGTGGAG' 20848 214 365
66 FOKI 'ATTATTATTCAAACATCC 21439 591 375
67 FOKI 'GAAAGAGCACCACCATCC 21945 506 378
68 FOKI GGATGTTTGTTCTT' 22189 244 387
69 FOKI GGATGAGATAGTAG' 22979 790 391
70 FOKI 'CTAAAGCAGCCAACATCC 22986 7 410
71 FOKI 'TAGCCCGAGCCATCATCC 23199 213 457
72 FOKI 'ACCGTCTGTCCACCATCC 23409 210 463
73 FOKI 'CTTCAGGCTGAGACATCC 23645 236 463
74 FOKI GGATGTGGAGGTGC' 24536 891 472
75 FOKI GGATGAACGTGTCC' 25548 1012 506
76 FOKI GGATGGTGGGATCA' 26123 575 521
77 FOKI 'AGCCGGCTGGACGCATCC 26193 70 523
78 FOKI 'TAAGGCTGCGTCTCATCC 26256 63 552
79 FOKI GGATGAGCTCCAGG' 26313 57 561
80 FOKI GGATGGTCTCGTTG' 26325 12 575
81 FOKI 'AGGTGCAGTACAGCATCC 27225 900 586
82 FOKI 'TCTGACATGGCCTCATCC 30013 2788 591
83 FOKI 'CTGGATTCCCAGGCATCC 30301 288 643
84 FOKI 'TTCACTTTCTTCACATCC 30521 220 651
85 FOKI GGATGAATAAATCA' 30978 457 698
86 FOKI GGATGACACCGTGT' 31221 243 718
87 FOKI 'AAGACATGCATTTCATCC 32485 1264 769
88 FOKI GGATGCTGCGAGTC' 32647 162 790
89 FOKI GGATGGACAGATGT' 32678 31 812
90 FOKI GGATGTGTTCAGTA' 32941 263 891
91 FOKI GGATGTTCCCTGGC' 32992 51 900
92 FOKI 'CAGCGCAGGTGCTCATCC 34064 1072 947
93 FOKI 'GTTGACCAGAGTTCATCC 35360 1296 1012
94 FOKI 'ACAAATGTCAAGGCATCC 35633 273 1021
95 FOKI GGATGTTGATGATT' 35757 124 1072
96 FOKI GGATGAGATTACCA' 36278 521 1082
97 FOKI GGATGTCGCGCCTC' 36669 391 1260
98 FOKI 'CTGCTGAGACCACCATCC 36960 291 1264
99 FOKI 'AGTTGATTTCCACCATCC 37232 272 1296
100 FOKI GGATGTCAGCGGGA' 37376 144 1516
101 FOKI 'TCCTGACCGAACACATCC 39391 2015 2015
561 2788
Matches found= 3
Name Sequence Position Fragment lengths
1 FSPI TGC'GCA 3750 3749 711
2 FSPI TGC'GCA 10225 6475 3749
3 FSPI TGC'GCA 39241 29016 6475
711 29016
Matches found= 19
Name Sequence Position Fragment lengths
1 HAEII GGCGC'T 937 936 45
2 HAEII AGCGC'T 2010 1073 159
3 HAEII GGCGC'T 9610 7600 530
4 HAEII GGCGC'C 11270 1660 705
5 HAEII GGCGC'C 15027 3757 729
6 HAEII AGCGC'C 16245 1218 901
7 HAEII GGCGC'T 20116 3871 936
8 HAEII GGCGC'C 21593 1477 997
9 HAEII GGCGC'C 22590 997 1073
10 HAEII GGCGC'C 24795 2205 1218
11 HAEII AGCGC'T 24954 159 1477
12 HAEII AGCGC'C 25855 901 1660
13 HAEII AGCGC'T 26560 705 1815
14 HAEII GGCGC'C 27289 729 2039
15 HAEII GGCGC'C 32030 4741 2205
16 HAEII GGCGC'C 32075 45 3493
17 HAEII AGCGC'T 33890 1815 3757
18 HAEII GGCGC'T 37383 3493 3871
19 HAEII AGCGC'C 39422 2039 4741
530 7600
Matches found= 64
Name Sequence Position Fragment lengths
1 HGAI GACGCACCAG' 423 422 3
2 HGAI GACGCCTCTC' 1910 1487 12
3 HGAI GACGCCTGAG' 3040 1130 34
4 HGAI 'AGCTCAACACGCGTC 3644 604 35
5 HGAI GACGCACATC' 3682 38 38
6 HGAI 'GGTGTGAATGGCGTC 4759 1077 41
7 HGAI 'GTCACCAAAAGCGTC 4771 12 43
8 HGAI GACGCAAGAG' 6399 1628 45
9 HGAI GACGCTGGTG' 6561 162 61
10 HGAI GACGCCGCCC' 9642 3081 65
11 HGAI GACGCAGAAC' 9762 120 72
12 HGAI 'GCGTGTTAGCGCGTC 10897 1135 76
13 HGAI 'TTAACAGTCAGCGTC 11806 909 80
14 HGAI GACGCACCAG' 12802 996 82
15 HGAI GACGCGTGTG' 13492 690 120
16 HGAI GACGCTGGTC' 15353 1861 126
17 HGAI 'GAAGGTGCTTGCGTC 15479 126 127
18 HGAI GACGCAAAGG' 15942 463 148
19 HGAI 'GGAGCGTTCAGCGTC 16192 250 152
20 HGAI 'GTGACTGCGCGCGTC 16369 177 162
21 HGAI GACGCAGAGG' 16907 538 162
22 HGAI 'CTAAGCTTGCGCGTC 16983 76 177
23 HGAI 'GAATCGGCCCGCGTC 17220 237 190
24 HGAI GACGCAAGAG' 17916 696 207
25 HGAI GACGCTGGTG' 18078 162 213
26 HGAI 'CTCGTTTGCCGCGTC 18989 911 237
27 HGAI GACGCAGCAG' 19061 72 240
28 HGAI GACGCTGCCG' 19141 80 250
29 HGAI GACGCTGAAG' 19895 754 253
30 HGAI GACGCCGCCC' 20148 253 261
31 HGAI GACGCACCAG' 23489 3341 270
32 HGAI GACGCCCGTG' 23571 82 361
33 HGAI GACGCCTCTT' 24058 487 422
34 HGAI 'CAGGGACACGGCGTC 24599 541 432
35 HGAI GACGCCGTTC' 25111 512 447
36 HGAI 'AAATCGCCACGCGTC 25238 127 452
37 HGAI 'ACCCACGGCAGCGTC 25272 34 463
38 HGAI 'CAGCACCATGGCGTC 25934 662 469
39 HGAI 'TCGTTTGCGTGCGTC 25999 65 487
40 HGAI GACGCATCCG' 26212 213 488
41 HGAI 'GAGTAAGGCTGCGTC 26253 41 512
42 HGAI 'TTCGCCCAGCGCGTC 26523 270 538
43 HGAI 'AGTTCTGGGGGCGTC 26992 469 541
44 HGAI 'ATGTGAAGATGCGTC 27035 43 604
45 HGAI 'GCTACGAATAGCGTC 27187 152 662
46 HGAI 'CAGATAAGCAGCGTC 27548 361 690
47 HGAI GACGCAAAAG' 27788 240 696
48 HGAI 'TCTTCACGATGCGTC 29213 1425 754
49 HGAI GACGCACATA' 30419 1206 872
50 HGAI 'AAACTGTGCAGCGTC 30609 190 909
51 HGAI 'GGGCTAAAAAGCGTC 32874 2265 911
52 HGAI GACGCCTGTC' 33081 207 996
53 HGAI GACGCTGGTA' 33569 488 1077
54 HGAI 'AGAGAAAATGGCGTC 33630 61 1130
55 HGAI 'CAGTGAACCGGCGTC 34502 872 1135
56 HGAI 'CTTGGCCTCCGCGTC 35835 1333 1206
57 HGAI GACGCCACTT' 35838 3 1333
58 HGAI 'CAGGATCAGTGCGTC 36285 447 1425
59 HGAI GACGCGCGGG' 36717 432 1487
60 HGAI 'GTTGACCTGAGCGTC 36752 35 1628
61 HGAI GACGCGCTTC' 37204 452 1861
62 HGAI GACGCAGAGC' 37465 261 2265
63 HGAI GACGCCTGGC' 37510 45 2294
64 HGAI 'TCGTTAGCGGGCGTC 37658 148 3081
2294 3341
Matches found= 43
Name Sequence Position Fragment lengths
1 HGIAI GAGCT'C 791 790 8
2 HGIAI GTGCA'C 1674 883 8
3 HGIAI GTGCA'C 2601 927 17
4 HGIAI GTGCA'C 2609 8 36
5 HGIAI GAGCA'C 2907 298 51
6 HGIAI GAGCT'C 3648 741 100
7 HGIAI GTGCT'C 4845 1197 102
8 HGIAI GTGCA'C 6055 1210 148
9 HGIAI GTGCA'C 6063 8 230
10 HGIAI GAGCT'C 6621 558 282
11 HGIAI GAGCT'C 6851 230 298
12 HGIAI GTGCA'C 11012 4161 308
13 HGIAI GAGCA'C 11635 623 324
14 HGIAI GAGCT'C 11981 346 346
15 HGIAI GTGCT'C 12129 148 359
16 HGIAI GAGCT'C 15113 2984 416
17 HGIAI GTGCA'C 16152 1039 486
18 HGIAI GTGCT'C 16568 416 558
19 HGIAI GAGCT'C 16670 102 563
20 HGIAI GAGCT'C 18138 1468 623
21 HGIAI GAGCT'C 19938 1800 687
22 HGIAI GAGCA'C 20926 988 706
23 HGIAI GAGCA'C 21954 1028 741
24 HGIAI GAGCA'C 23692 1738 789
25 HGIAI GTGCT'C 24537 845 790
26 HGIAI GTGCA'C 25326 789 845
27 HGIAI GAGCT'C 26308 982 883
28 HGIAI GAGCA'C 26408 100 893
29 HGIAI GAGCT'C 27095 687 927
30 HGIAI GAGCT'C 32038 4943 982
31 HGIAI GAGCT'C 32744 706 988
32 HGIAI GAGCA'C 32795 51 1028
33 HGIAI GAGCA'C 32812 17 1039
34 HGIAI GTGCT'C 34077 1265 1193
35 HGIAI GAGCA'C 35508 1431 1197
36 HGIAI GTGCT'C 36701 1193 1210
37 HGIAI GAGCA'C 37187 486 1265
38 HGIAI GTGCA'C 37223 36 1431
39 HGIAI GAGCT'C 37547 324 1468
40 HGIAI GTGCA'C 38110 563 1738
41 HGIAI GTGCA'C 38469 359 1800
42 HGIAI GTGCT'C 38751 282 2984
43 HGIAI GAGCA'C 39059 308 4161
893 4943
Matches found= 33
Name Sequence Position Fragment lengths
1 HINCII GTC'AAC 478 477 20
2 HINCII GTT'GAC 976 498 86
3 HINCII GTT'GAC 1499 523 90
4 HINCII GTC'GAC 7275 5776 108
5 HINCII GTC'GAC 10163 2888 159
6 HINCII GTT'GAC 12960 2797 162
7 HINCII GTT'AAC 13068 108 244
8 HINCII GTC'AAC 13635 567 248
9 HINCII GTT'GAC 13725 90 274
10 HINCII GTT'AAC 14050 325 325
11 HINCII GTT'GAC 14408 358 358
12 HINCII GTC'AAC 14494 86 362
13 HINCII GTT'AAC 14897 403 403
14 HINCII GTT'GAC 18376 3479 477
15 HINCII GTC'AAC 18538 162 480
16 HINCII GTC'AAC 19048 510 498
17 HINCII GTC'AAC 21262 2214 510
18 HINCII GTT'GAC 22357 1095 523
19 HINCII GTC'AAC 22837 480 567
20 HINCII GTT'AAC 23815 978 580
21 HINCII GTT'GAC 23974 159 601
22 HINCII GTT'AAC 28031 4057 978
23 HINCII GTC'AAC 29388 1357 1095
24 HINCII GTC'GAC 31282 1894 1118
25 HINCII GTC'AAC 31883 601 1357
26 HINCII GTT'AAC 32127 244 1894
27 HINCII GTT'AAC 35001 2874 2214
28 HINCII GTT'GAC 35363 362 2349
29 HINCII GTT'AAC 36481 1118 2797
30 HINCII GTT'GAC 36755 274 2874
31 HINCII GTC'GAC 37003 248 2888
32 HINCII GTC'GAC 37023 20 3479
33 HINCII GTT'AAC 39372 2349 4057
580 5776
Matches found= 13
Name Sequence Position Fragment lengths
1 HINDIII A'AGCTT 1441 1440 636
2 HINDIII A'AGCTT 2909 1468 668
3 HINDIII A'AGCTT 4142 1233 1233
4 HINDIII A'AGCTT 6081 1939 1252
5 HINDIII A'AGCTT 15682 9601 1440
6 HINDIII A'AGCTT 16350 668 1468
7 HINDIII A'AGCTT 16986 636 1828
8 HINDIII A'AGCTT 22421 5435 1939
9 HINDIII A'AGCTT 23673 1252 2797
10 HINDIII A'AGCTT 26470 2797 3092
11 HINDIII A'AGCTT 30895 4425 4137
12 HINDIII A'AGCTT 32723 1828 4425
13 HINDIII A'AGCTT 36860 4137 5435
3092 9601
Matches found= 9
Name Sequence Position Fragment lengths
1 HPAI GTT'AAC 13068 13067 580
2 HPAI GTT'AAC 14050 982 847
3 HPAI GTT'AAC 14897 847 982
4 HPAI GTT'AAC 23815 8918 1480
5 HPAI GTT'AAC 28031 4216 2874
6 HPAI GTT'AAC 32127 4096 2891
7 HPAI GTT'AAC 35001 2874 4096
8 HPAI GTT'AAC 36481 1480 4216
9 HPAI GTT'AAC 39372 2891 8918
580 13067
Matches found= 114
Name Sequence Position Fragment lengths
1 HPHI GGTGATAAGGGAA' 97 96 -
2 HPHI GGTGAGACTTTAT' 225 128 4
3 HPHI 'ATGCTGGTCACC 453 228 9
4 HPHI GGTGACAACTATG' 510 57 12
5 HPHI 'CGTTCATTCACC 700 190 12
6 HPHI GGTGACAGATGTT' 843 143 17
7 HPHI 'CAAAGATTCACC 1001 158 22
8 HPHI GGTGAGTGTCCCA' 1151 150 25
9 HPHI 'TCTGAAGTCACC 1378 227 28
10 HPHI GGTGATACTCTAA' 1533 155 42
11 HPHI 'CAGGTACTCACC 1789 256 43
12 HPHI 'TTGATGGTCACC 2643 854 44
13 HPHI GGTGAATCCTCTG' 2700 57 51
14 HPHI GGTGAGATGACTG' 2728 28 52
15 HPHI 'TCACACATCACC 3331 603 57
16 HPHI GGTGACGCACATC' 3682 351 57
17 HPHI GGTGACAAGGCGG' 3794 112 61
18 HPHI 'TGGAAGCTCACC 3856 62 62
19 HPHI 'ACAAGCTTCACC 4139 283 65
20 HPHI GGTGAGTGTTCTA' 4270 131 72
21 HPHI 'AATGGCGTCACC 4765 495 72
22 HPHI 'AAAAGCGTCACC 4777 12 80
23 HPHI GGTGACATTGTAT' 5675 898 86
24 HPHI 'AGTATGTTCACC 5718 43 96
25 HPHI 'CCCCGACTCACC 5779 61 105
26 HPHI GGTGAAGCTTGAG' 6089 310 109
27 HPHI 'CCTGTAGTCACC 6106 17 112
28 HPHI 'ACCACCATCACC 6348 242 114
29 HPHI 'TTATGTGTCACC 6779 431 128
30 HPHI 'TCATCGCTCACC 7116 337 128
31 HPHI GGTGAAATCGTTG' 7188 72 128
32 HPHI GGTGACCATGCAG' 7253 65 131
33 HPHI GGTGAGCTGTGGT' 7551 298 134
34 HPHI 'ATCATCTTCACC 7876 325 137
35 HPHI 'ACTTTTCTCACC 8060 184 143
36 HPHI GGTGACTTTTCTC' 8069 9 146
37 HPHI 'GCTTCACTCACC 8275 206 150
38 HPHI GGTGACTGTGGAG' 8495 220 150
39 HPHI GGTGAAATGATCA' 8609 114 153
40 HPHI GGTGAGTGAGATA' 9308 699 155
41 HPHI 'GGCGCTCTCACC 9605 297 155
42 HPHI 'ATTTGTTTCACC 9987 382 157
43 HPHI 'GTGTCCCTCACC 10067 80 158
44 HPHI GGTGAGATGACTT' 10925 858 160
45 HPHI 'TTAAAAATCACC 10977 52 168
46 HPHI GGTGAGAAGACAA' 11697 720 172
47 HPHI GGTGATAAGGGAA' 12476 779 182
48 HPHI GGTGAGACTTTAT' 12604 128 184
49 HPHI 'ATGCTGGTCACC 12832 228 185
50 HPHI 'CCATACGTCACC 12992 160 190
51 HPHI GGTGATCTGAGGT' 13787 795 190
52 HPHI 'TTGTTTGTCACC 14822 1035 192
53 HPHI 'GGTGGTCTCACC 14908 86 195
54 HPHI GGTGAAACGCATC' 15042 134 196
55 HPHI GGTGACAAGGTGG' 15273 231 206
56 HPHI 'ATCGGCTTCACC 15317 44 206
57 HPHI 'GCGTCCTTCACC 15489 172 216
58 HPHI GGTGAATATTGAG' 15758 269 220
59 HPHI 'ATGGGCTTCACC 15980 222 222
60 HPHI GGTGAGGGTCCTG' 16137 157 227
61 HPHI GGTGAATAGTAAT' 16586 449 228
62 HPHI 'ATAAATATCACC 17041 455 228
63 HPHI GGTGACATCGAGT' 17363 322 228
64 HPHI GGTGATGCTGGAT' 17756 393 231
65 HPHI 'ACCACCATCACC 17865 109 233
66 HPHI 'TGGTCGCTCACC 18639 774 242
67 HPHI GGTGACCATGCAG' 18776 137 256
68 HPHI GGTGACCCCCCCC' 18788 12 269
69 HPHI 'TACCTGATCACC 19106 318 283
70 HPHI GGTGATAACATCG' 19252 146 297
71 HPHI 'TCATTTGTCACC 19751 499 298
72 HPHI GGTGAGCTCTGAC' 19943 192 309
73 HPHI 'GGCGCTCTCACC 20111 168 310
74 HPHI GGTGACATTTACA' 20919 808 318
75 HPHI GGTGACAAACCCT' 21761 842 322
76 HPHI GGTGAAAAAGGGA' 21911 150 325
77 HPHI GGTGAGAAGACAA' 22016 105 337
78 HPHI 'TGCCTCTTCACC 22067 51 351
79 HPHI GGTGATAAGGGAA' 23163 1096 362
80 HPHI GGTGAGACTTTAT' 23291 128 364
81 HPHI 'ATGCTGGTCACC 23519 228 371
82 HPHI 'TTTAACCTCACC 23725 206 382
83 HPHI GGTGAGTGAAGCT' 24923 1198 389
84 HPHI 'GCGTGACTCACC 25139 216 393
85 HPHI 'CACCATTTCACC 25324 185 431
86 HPHI 'AACTGACTCACC 25686 362 449
87 HPHI GGTGACTACCTTC' 25881 195 450
88 HPHI 'CACATGGTCACC 25923 42 455
89 HPHI 'GGTGGGATCACC 26113 190 494
90 HPHI GGTGAACAGGCTG' 26295 182 495
91 HPHI 'TCTTTCGTCACC 27200 905 499
92 HPHI 'TTTACCATCACC 27821 621 603
93 HPHI 'TCAGGTTTCACC 29264 1443 615
94 HPHI 'AAACGTGTCACC 30224 960 621
95 HPHI GGTGAGAAGAGAA' 30379 155 699
96 HPHI GGTGATTTACCTG' 31339 960 720
97 HPHI 'CTGCGTTTCACC 32204 865 774
98 HPHI GGTGATATTCTGC' 32208 4 779
99 HPHI 'CTTCACTTCACC 32441 233 795
100 HPHI GGTGAGCCAGGAT' 32637 196 808
101 HPHI 'AACGAGGTCACC 32709 72 835
102 HPHI 'TGAAACCTCACC 34710 2001 842
103 HPHI GGTGATCAGCTTT' 35545 835 854
104 HPHI GGTGACAACTACC' 35909 364 858
105 HPHI GGTGACCTTTGGC' 35931 22 865
106 HPHI 'TCTAGGTTCACC 37150 1219 898
107 HPHI 'CGGGAGCTCACC 37539 389 905
108 HPHI 'TGACTCGTCACC 37848 309 960
109 HPHI GGTGAGCAACGAG' 38001 153 960
110 HPHI GGTGAGAAATTTC' 38026 25 1035
111 HPHI 'TCCAGTCTCACC 38641 615 1096
112 HPHI GGTGACTTTGGCT' 39091 450 1198
113 HPHI 'GCCGTCCTCACC 39462 371 1219
114 HPHI GGTGACTTTNNNN' 39956 494 1443
- 2001
Matches found= 2
Name Sequence Position Fragment lengths
1 KPNI GGTAC'C 30296 30295 3407
2 KPNI GGTAC'C 33703 3407 6249
6249 30295
Matches found= 111
Name Sequence Position Fragment lengths
1 MBOII 'TGATCAATCTTC 650 649 2
2 MBOII 'CTCTCTGTCTTC 764 114 2
3 MBOII 'TCTGGGTTCTTC 1302 538 3
4 MBOII GAAGAGATGTTTG' 1730 428 3
5 MBOII 'TTATTAGTCTTC 1853 123 3
6 MBOII GAAGAGCGAAATA' 2133 280 5
7 MBOII GAAGAAGAAAAAG' 2346 213 6
8 MBOII GAAGAAAAAGCAT' 2349 3 9
9 MBOII 'ATGCCGTTCTTC 2447 98 9
10 MBOII 'GTTCATTTCTTC 3054 607 9
11 MBOII 'TTGTGGTTCTTC 3217 163 10
12 MBOII 'AAGGTGTTCTTC 4631 1414 12
13 MBOII GAAGATTTTTCCT' 5977 1346 16
14 MBOII GAAGACTCAGACT' 7381 1404 18
15 MBOII GAAGAGCCAGCTG' 7413 32 18
16 MBOII 'AGCATCATCTTC 7873 460 32
17 MBOII 'TTTCAGGTCTTC 7973 100 39
18 MBOII GAAGATATGAGGT' 8544 571 43
19 MBOII 'AAACTTGTCTTC 8831 287 46
20 MBOII 'TCACATCTCTTC 9184 353 50
21 MBOII GAAGACAAGAAGG' 9910 726 51
22 MBOII 'GCCATGATCTTC 10281 371 61
23 MBOII 'AGCTTCATCTTC 10485 204 72
24 MBOII 'TCTAAAGTCTTC 10495 10 75
25 MBOII 'TTAATTTTCTTC 10688 193 83
26 MBOII 'ACACGGTTCTTC 11461 773 91
27 MBOII 'TCATTATTCTTC 11700 239 92
28 MBOII GAAGACAACAGTC' 11702 2 98
29 MBOII GAAGAGAGCAATA' 11891 189 100
30 MBOII GAAGAGAAGATCC' 12892 1001 103
31 MBOII GAAGATCCGGGGG' 12897 5 106
32 MBOII GAAGACTTGTCGG' 12980 83 114
33 MBOII 'TACTGAATCTTC 13110 130 115
34 MBOII 'GTTTCTTTCTTC 13126 16 123
35 MBOII GAAGAATTTAGTG' 13372 246 128
36 MBOII GAAGAATAAAAAG' 13986 614 128
37 MBOII GAAGAAACTGTGT' 14207 221 130
38 MBOII 'CCTTTTGTCTTC 14647 440 133
39 MBOII 'GCCGCCTTCTTC 15386 739 136
40 MBOII GAAGAAACCCGAC' 15814 428 143
41 MBOII GAAGAAGGCCATC' 15965 151 151
42 MBOII 'TTGTGTGTCTTC 16153 188 163
43 MBOII GAAGAGATGAACC' 16612 459 165
44 MBOII GAAGAGGATTTGA' 16814 202 174
45 MBOII GAAGAGCGGACAG' 17514 700 174
46 MBOII GAAGATGTCAAAG' 18449 935 175
47 MBOII GAAGAGCCCTGTG' 18936 487 177
48 MBOII GAAGAGGTGCCGT' 19042 106 179
49 MBOII 'GCATCGCTCTTC 19307 265 184
50 MBOII GAAGACGTTCCCG' 19435 128 188
51 MBOII 'CAGCCGGTCTTC 19527 92 189
52 MBOII 'GCCATCCTCTTC 19539 12 193
53 MBOII GAAGAGTGAATTC' 19718 179 202
54 MBOII GAAGAACACTGAT' 21299 1581 202
55 MBOII 'CTGAAGTTCTTC 21350 51 204
56 MBOII GAAGAATGCCTTT' 21483 133 213
57 MBOII 'AGGCGGCTCTTC 21780 297 221
58 MBOII GAAGACAAACACA' 22021 241 229
59 MBOII 'CCGTGCCTCTTC 22064 43 239
60 MBOII GAAGAACTGAAAC' 22465 401 241
61 MBOII GAAGAACATTTTA' 23598 1133 246
62 MBOII 'CTCTTGCTCTTC 23637 39 265
63 MBOII 'GGACGCCTCTTC 24047 410 265
64 MBOII GAAGAATTCATCA' 24312 265 280
65 MBOII GAAGACGTTGAAC' 24600 288 287
66 MBOII GAAGAAGCCGTAG' 24775 175 288
67 MBOII GAAGAGTTCCGGA' 25004 229 288
68 MBOII 'CGTCCTCTCTTC 26534 1530 297
69 MBOII GAAGAGGTCATGA' 26875 341 300
70 MBOII GAAGATGCGTCCA' 27052 177 325
71 MBOII 'CTCGCCTTCTTC 29206 2154 341
72 MBOII 'TTTGTTGTCTTC 29297 91 352
73 MBOII 'GTGGAATTCTTC 29685 388 353
74 MBOII GAAGAAAACCTTT' 29760 75 371
75 MBOII 'ATGTTAATCTTC 29896 136 373
76 MBOII GAAGAGAATGATG' 30384 488 388
77 MBOII 'GGCCTCGTCTTC 30512 128 401
78 MBOII 'TTCACTTTCTTC 30521 9 410
79 MBOII 'TCTGCAATCTTC 30539 18 415
80 MBOII 'CTAAAATTCTTC 31006 467 421
81 MBOII 'TTTATTATCTTC 31067 61 428
82 MBOII GAAGAAAGTAATC' 31645 578 428
83 MBOII GAAGAAAACAAGA' 32066 421 440
84 MBOII 'GTATTTGTCTTC 32354 288 459
85 MBOII GAAGACATGCATT' 32497 143 460
86 MBOII GAAGAAAGCTGGC' 32699 202 467
87 MBOII GAAGAGGAGGCTC' 33051 352 485
88 MBOII GAAGAAAATAGTT' 33123 72 487
89 MBOII 'TTGTTGTTCTTC 33297 174 488
90 MBOII GAAGACATCAGCT' 33412 115 538
91 MBOII GAAGAAACTCATC' 33458 46 571
92 MBOII 'ACAGATGTCTTC 33831 373 578
93 MBOII 'CTTTCTCTCTTC 35009 1178 607
94 MBOII 'TGGCGGCTCTTC 35027 18 614
95 MBOII GAAGAACAAAAGC' 35442 415 649
96 MBOII 'CGATGTCTCTTC 35444 2 700
97 MBOII GAAGAGGAGGAAG' 35618 174 726
98 MBOII GAAGAGCTAAACA' 35627 9 739
99 MBOII 'CACCTCCTCTTC 36581 954 773
100 MBOII 'CCGGGAGTCTTC 36684 103 784
101 MBOII GAAGAAAACGCAT' 36734 50 935
102 MBOII GAAGAAGGTAAAG' 36918 184 954
103 MBOII 'ACCATCCTCTTC 37243 325 954
104 MBOII 'GTCTCCCTCTTC 38027 784 1001
105 MBOII 'TTCTCTTTCTTC 38981 954 1133
106 MBOII 'TTCTTCCTCTTC 38987 6 1178
107 MBOII 'TTCTGTTTCTTC 38996 9 1346
108 MBOII 'TGTTTCTTCTTC 38999 3 1404
109 MBOII 'TTCTTCTTCTTC 39002 3 1414
110 MBOII 'ATTCTCCTCTTC 39487 485 1530
111 MBOII GAAGAGACACAAA' 39652 165 1581
300 2154
Matches found= 6
Name Sequence Position Fragment lengths
1 MLUI A'CGCGT 3653 3652 228
2 MLUI A'CGCGT 13484 9831 1899
3 MLUI A'CGCGT 13712 228 3652
4 MLUI A'CGCGT 19965 6253 5282
5 MLUI A'CGCGT 25247 5282 6253
6 MLUI A'CGCGT 27146 1899 9831
12806 12806
Matches found= 7
Name Sequence Position Fragment lengths
1 MSTII CC'TGAGG 3036 3035 493
2 MSTII CC'TCAGG 12339 9303 3035
3 MSTII CC'TGAGG 19300 6961 3057
4 MSTII CC'TCAGG 23026 3726 3507
5 MSTII CC'TTAGG 32895 9869 3726
6 MSTII CC'TGAGG 35952 3057 6961
7 MSTII CC'TGAGG 36445 493 9303
3507 9869
Matches found= 4
Name Sequence Position Fragment lengths
1 NAEI GCC'GGC 8806 8805 1307
2 NAEI GCC'GGC 11363 2557 2557
3 NAEI GCC'GGC 26197 14834 8805
4 NAEI GCC'GGC 27504 1307 12448
12448 14834
Matches found= 8
Name Sequence Position Fragment lengths
1 NARI GG'CGCC 11267 11266 45
2 NARI GG'CGCC 15024 3757 997
3 NARI GG'CGCC 21590 6566 2205
4 NARI GG'CGCC 22587 997 2494
5 NARI GG'CGCC 24792 2205 3757
6 NARI GG'CGCC 27286 2494 4741
7 NARI GG'CGCC 32027 4741 6566
8 NARI GG'CGCC 32072 45 7880
7880 11266
Matches found= 35
Name Sequence Position Fragment lengths
1 NCII CC'CGG 931 930 1
2 NCII CC'CGG 2559 1628 1
3 NCII CC'GGG 2560 1 1
4 NCII CC'CGG 4021 1461 1
5 NCII CC'GGG 8010 3989 1
6 NCII CC'CGG 8165 155 1
7 NCII CC'GGG 8166 1 17
8 NCII CC'CGG 9478 1312 65
9 NCII CC'GGG 12892 3414 83
10 NCII CC'CGG 13679 787 90
11 NCII CC'GGG 13680 1 142
12 NCII CC'GGG 15021 1341 143
13 NCII CC'GGG 16305 1284 155
14 NCII CC'GGG 19905 3600 163
15 NCII CC'GGG 21071 1166 261
16 NCII CC'GGG 25447 4376 289
17 NCII CC'CGG 25464 17 296
18 NCII CC'GGG 25465 1 478
19 NCII CC'GGG 25548 83 626
20 NCII CC'GGG 26026 478 787
21 NCII CC'CGG 27213 1187 930
22 NCII CC'GGG 27214 1 1166
23 NCII CC'CGG 32216 5002 1187
24 NCII CC'CGG 34496 2280 1284
25 NCII CC'CGG 36523 2027 1312
26 NCII CC'GGG 36686 163 1341
27 NCII CC'GGG 36982 296 1353
28 NCII CC'CGG 37047 65 1461
29 NCII CC'GGG 37189 142 1628
30 NCII CC'CGG 37450 261 2027
31 NCII CC'GGG 37540 90 2280
32 NCII CC'CGG 37683 143 3414
33 NCII CC'GGG 37684 1 3600
34 NCII CC'CGG 39037 1353 3989
35 NCII CC'GGG 39663 626 4376
289 5002
Matches found= 16
Name Sequence Position Fragment lengths
1 NCOI C'CATGG 15 14 14
2 NCOI C'CATGG 10625 10610 118
3 NCOI C'CATGG 11270 645 119
4 NCOI C'CATGG 12276 1006 202
5 NCOI C'CATGG 12394 118 481
6 NCOI C'CATGG 14006 1612 645
7 NCOI C'CATGG 14487 481 839
8 NCOI C'CATGG 15777 1290 1006
9 NCOI C'CATGG 15979 202 1290
10 NCOI C'CATGG 16818 839 1369
11 NCOI C'CATGG 21593 4775 1612
12 NCOI C'CATGG 22962 1369 1679
13 NCOI C'CATGG 23081 119 2859
14 NCOI C'CATGG 25940 2859 4775
15 NCOI C'CATGG 31823 5883 5883
16 NCOI C'CATGG 38273 6450 6450
1679 10610
Matches found= 6
Name Sequence Position Fragment lengths
1 NDEI CA'TATG 3725 3724 1148
2 NDEI CA'TATG 10157 6432 3724
3 NDEI CA'TATG 20631 10474 5648
4 NDEI CA'TATG 26279 5648 5969
5 NDEI CA'TATG 27427 1148 6432
6 NDEI CA'TATG 33396 5969 6556
6556 10474
Matches found= 9
Name Sequence Position Fragment lengths
1 NHEI G'CTAGC 4834 4833 19
2 NHEI G'CTAGC 5479 645 171
3 NHEI G'CTAGC 15862 10383 398
4 NHEI G'CTAGC 18550 2688 645
5 NHEI G'CTAGC 24944 6394 725
6 NHEI G'CTAGC 25669 725 2688
7 NHEI G'CTAGC 39364 13695 4833
8 NHEI G'CTAGC 39383 19 6394
9 NHEI G'CTAGC 39554 171 10383
398 13695
Matches found= 1
Name Sequence Position Fragment lengths
1 NOTI GC'GGCCGC 20357 20356 19595
19595 20356
Matches found= 2
Name Sequence Position Fragment lengths
1 NRUI TCG'CGA 3579 3578 345
2 NRUI TCG'CGA 39607 36028 3578
345 36028
Matches found= 8
Name Sequence Position Fragment lengths
1 NSII ATGCA'T 5763 5762 205
2 NSII ATGCA'T 10180 4417 315
3 NSII ATGCA'T 29625 19445 1141
4 NSII ATGCA'T 30766 1141 1209
5 NSII ATGCA'T 31975 1209 1461
6 NSII ATGCA'T 32290 315 4417
7 NSII ATGCA'T 32495 205 5762
8 NSII ATGCA'T 38491 5996 5996
1461 19445
Matches found= 69
Name Sequence Position Fragment lengths
1 NSPBII CAG'CTG 102 101 17
2 NSPBII CCG'CTG 256 154 24
3 NSPBII CAG'CTG 426 170 28
4 NSPBII CAG'CGG 1371 945 28
5 NSPBII CAG'CTG 1435 64 28
6 NSPBII CAG'CTG 2797 1362 28
7 NSPBII CAG'CTG 3618 821 54
8 NSPBII CAG'CTG 3707 89 64
9 NSPBII CAG'CTG 3908 201 84
10 NSPBII CAG'CGG 4194 286 89
11 NSPBII CAG'CTG 4892 698 101
12 NSPBII CAG'CGG 5867 975 110
13 NSPBII CAG'CTG 5895 28 115
14 NSPBII CAG'CTG 6579 684 126
15 NSPBII CAG'CTG 7208 629 145
16 NSPBII CAG'CTG 7410 202 154
17 NSPBII CAG'CTG 7619 209 154
18 NSPBII CAG'CGG 8186 567 154
19 NSPBII CAG'CTG 8417 231 170
20 NSPBII CAG'CTG 9577 1160 170
21 NSPBII CCG'CTG 9865 288 170
22 NSPBII CAG'CGG 11618 1753 201
23 NSPBII CAG'CTG 11646 28 202
24 NSPBII CAG'CTG 12163 517 209
25 NSPBII CAG'CTG 12481 318 231
26 NSPBII CCG'CTG 12635 154 271
27 NSPBII CAG'CTG 12805 170 286
28 NSPBII CAG'CTG 13437 632 288
29 NSPBII CCG'CTG 14338 901 288
30 NSPBII CCG'CTG 14448 110 293
31 NSPBII CAG'CGG 14472 24 318
32 NSPBII CAG'CTG 15083 611 318
33 NSPBII CAG'CTG 16498 1415 319
34 NSPBII CAG'CGG 16843 345 341
35 NSPBII CAG'CGG 17537 694 345
36 NSPBII CAG'CTG 17565 28 372
37 NSPBII CAG'CTG 18096 531 504
38 NSPBII CAG'CTG 18731 635 517
39 NSPBII CAG'CTG 20083 1352 531
40 NSPBII CCG'CTG 20371 288 561
41 NSPBII CAG'CGG 21937 1566 567
42 NSPBII CAG'CTG 21965 28 573
43 NSPBII CAG'CTG 22849 884 574
44 NSPBII CAG'CTG 23168 319 586
45 NSPBII CCG'CTG 23322 154 588
46 NSPBII CAG'CTG 23492 170 611
47 NSPBII CAG'CGG 24065 573 620
48 NSPBII CAG'CTG 24210 145 629
49 NSPBII CAG'CTG 24582 372 632
50 NSPBII CAG'CTG 25202 620 635
51 NSPBII CAG'CTG 25520 318 684
52 NSPBII CAG'CGG 26108 588 694
53 NSPBII CAG'CTG 26612 504 698
54 NSPBII CAG'CTG 26953 341 821
55 NSPBII CAG'CTG 27527 574 832
56 NSPBII CAG'CTG 27581 54 884
57 NSPBII CAG'CGG 29634 2053 892
58 NSPBII CAG'CTG 31410 1776 901
59 NSPBII CAG'CTG 31427 17 945
60 NSPBII CAG'CGG 33965 2538 975
61 NSPBII CAG'CTG 34526 561 1160
62 NSPBII CAG'CGG 34819 293 1352
63 NSPBII CCG'CGG 34945 126 1362
64 NSPBII CCG'CTG 35060 115 1415
65 NSPBII CCG'CTG 35144 84 1566
66 NSPBII CAG'CGG 37371 2227 1753
67 NSPBII CAG'CTG 37642 271 1776
68 NSPBII CAG'CTG 38534 892 2053
69 NSPBII CAG'CGG 39120 586 2227
832 2538
Matches found= 18
Name Sequence Position Fragment lengths
1 PFIMI CCACATG'CTGG 456 455 145
2 PFIMI CCAAAAT'ATGG 2112 1656 182
3 PFIMI CCACCAG'CTGG 4892 2780 185
4 PFIMI CCAGCTG'ATGG 7211 2319 455
5 PFIMI CCAGCTG'CTGG 11649 4438 458
6 PFIMI CCACATG'CTGG 12835 1186 833
7 PFIMI CCACGGG'CTGG 15334 2499 958
8 PFIMI CCACAGA'CTGG 17443 2109 1186
9 PFIMI CCAGCCT'TTGG 18276 833 1554
10 PFIMI CCAGCTG'ATGG 18734 458 1656
11 PFIMI CCACAAT'GTGG 18879 145 2109
12 PFIMI CCAGCTG'CTGG 21968 3089 2319
13 PFIMI CCACATG'CTGG 23522 1554 2404
14 PFIMI CCAGCAC'ATGG 25926 2404 2499
15 PFIMI CCAGCGG'ATGG 26111 185 2780
16 PFIMI CCACCAA'ATGG 27069 958 3089
17 PFIMI CCAAAAC'GTGG 32662 5593 4438
18 PFIMI CCACTAA'ATGG 39770 7108 5593
182 7108
Matches found= 10
Name Sequence Position Fragment lengths
1 PPUMI AG'GTCCC 696 695 695
2 PPUMI GG'GTCCC 1696 1000 720
3 PPUMI AG'GACCT 9569 7873 1000
4 PPUMI GG'GTCCT 16131 6562 1089
5 PPUMI AG'GACCC 18266 2135 1701
6 PPUMI GG'GTCCT 18986 720 2135
7 PPUMI AG'GACCT 20075 1089 4899
8 PPUMI AG'GTCCT 25616 5541 5541
9 PPUMI AG'GTCCT 33352 7736 6562
10 PPUMI AG'GACCC 38251 4899 7736
1701 7873
Matches found= 30
Name Sequence Position Fragment lengths
1 PSTI CTGCA'G 1894 1893 29
2 PSTI CTGCA'G 3531 1637 99
3 PSTI CTGCA'G 4604 1073 217
4 PSTI CTGCA'G 5903 1299 274
5 PSTI CTGCA'G 7442 1539 283
6 PSTI CTGCA'G 7752 310 298
7 PSTI CTGCA'G 8083 331 309
8 PSTI CTGCA'G 8633 550 310
9 PSTI CTGCA'G 9732 1099 331
10 PSTI CTGCA'G 10030 298 449
11 PSTI CTGCA'G 17025 6995 452
12 PSTI CTGCA'G 17474 449 550
13 PSTI CTGCA'G 17573 99 609
14 PSTI CTGCA'G 19629 2056 793
15 PSTI CTGCA'G 20238 609 797
16 PSTI CTGCA'G 20521 283 925
17 PSTI CTGCA'G 22368 1847 1073
18 PSTI CTGCA'G 22397 29 1099
19 PSTI CTGCA'G 25615 3218 1299
20 PSTI CTGCA'G 27424 1809 1439
21 PSTI CTGCA'G 27698 274 1539
22 PSTI CTGCA'G 28150 452 1637
23 PSTI CTGCA'G 30364 2214 1809
24 PSTI CTGCA'G 31157 793 1847
25 PSTI CTGCA'G 31466 309 1893
26 PSTI CTGCA'G 32391 925 2056
27 PSTI CTGCA'G 33188 797 2184
28 PSTI CTGCA'G 36112 2924 2214
29 PSTI CTGCA'G 38296 2184 2924
30 PSTI CTGCA'G 39735 1439 3218
217 6995
Matches found= 1
Name Sequence Position Fragment lengths
1 PVUI CGAT'CG 19382 19381 19381
20570 20570
Matches found= 43
Name Sequence Position Fragment lengths
1 PVUII CAG'CTG 102 101 17
2 PVUII CAG'CTG 426 324 54
3 PVUII CAG'CTG 1435 1009 89
4 PVUII CAG'CTG 2797 1362 101
5 PVUII CAG'CTG 3618 821 201
6 PVUII CAG'CTG 3707 89 202
7 PVUII CAG'CTG 3908 201 209
8 PVUII CAG'CTG 4892 984 318
9 PVUII CAG'CTG 5895 1003 318
10 PVUII CAG'CTG 6579 684 319
11 PVUII CAG'CTG 7208 629 324
12 PVUII CAG'CTG 7410 202 324
13 PVUII CAG'CTG 7619 209 324
14 PVUII CAG'CTG 8417 798 341
15 PVUII CAG'CTG 9577 1160 372
16 PVUII CAG'CTG 11646 2069 517
17 PVUII CAG'CTG 12163 517 531
18 PVUII CAG'CTG 12481 318 574
19 PVUII CAG'CTG 12805 324 620
20 PVUII CAG'CTG 13437 632 629
21 PVUII CAG'CTG 15083 1646 632
22 PVUII CAG'CTG 16498 1415 635
23 PVUII CAG'CTG 17565 1067 684
24 PVUII CAG'CTG 18096 531 718
25 PVUII CAG'CTG 18731 635 798
26 PVUII CAG'CTG 20083 1352 821
27 PVUII CAG'CTG 21965 1882 884
28 PVUII CAG'CTG 22849 884 892
29 PVUII CAG'CTG 23168 319 984
30 PVUII CAG'CTG 23492 324 1003
31 PVUII CAG'CTG 24210 718 1009
32 PVUII CAG'CTG 24582 372 1067
33 PVUII CAG'CTG 25202 620 1092
34 PVUII CAG'CTG 25520 318 1160
35 PVUII CAG'CTG 26612 1092 1352
36 PVUII CAG'CTG 26953 341 1362
37 PVUII CAG'CTG 27527 574 1415
38 PVUII CAG'CTG 27581 54 1418
39 PVUII CAG'CTG 31410 3829 1646
40 PVUII CAG'CTG 31427 17 1882
41 PVUII CAG'CTG 34526 3099 2069
42 PVUII CAG'CTG 37642 3116 3099
43 PVUII CAG'CTG 38534 892 3116
1418 3829
Matches found= 1
Name Sequence Position Fragment lengths
1 RSRII CG'GTCCG 35912 35911 4040
4040 35911
Matches found= 14
Name Sequence Position Fragment lengths
1 SACI GAGCT'C 791 790 230
2 SACI GAGCT'C 3648 2857 706
3 SACI GAGCT'C 6621 2973 787
4 SACI GAGCT'C 6851 230 790
5 SACI GAGCT'C 11981 5130 1468
6 SACI GAGCT'C 15113 3132 1557
7 SACI GAGCT'C 16670 1557 1800
8 SACI GAGCT'C 18138 1468 2405
9 SACI GAGCT'C 19938 1800 2857
10 SACI GAGCT'C 26308 6370 2973
11 SACI GAGCT'C 27095 787 3132
12 SACI GAGCT'C 32038 4943 4803
13 SACI GAGCT'C 32744 706 4943
14 SACI GAGCT'C 37547 4803 5130
2405 6370
Matches found= 1
Name Sequence Position Fragment lengths
1 SACII CCGC'GG 34946 34945 5006
5006 34945
Matches found= 5
Name Sequence Position Fragment lengths
1 SALI G'TCGAC 7273 7272 20
2 SALI G'TCGAC 10161 2888 2888
3 SALI G'TCGAC 31280 21119 2931
4 SALI G'TCGAC 37001 5721 5721
5 SALI G'TCGAC 37021 20 7272
2931 21119
Matches found= 5
Name Sequence Position Fragment lengths
1 SCAI AGT'ACT 5500 5499 6
2 SCAI AGT'ACT 5506 6 452
3 SCAI AGT'ACT 9129 3623 3623
4 SCAI AGT'ACT 26966 17837 5499
5 SCAI AGT'ACT 27418 452 12534
12534 17837
Matches found= 83
Name Sequence Position Fragment lengths
1 SFANI 'GCAGGACGTGCATC 319 318 -
2 SFANI 'ACGCCGACTGCATC 364 45 2
3 SFANI GATGCCCAGT' 1219 855 6
4 SFANI GATGCCAGCA' 2089 870 11
5 SFANI 'GAAGAAAAAGCATC 2336 247 22
6 SFANI GATGCCGTTC' 2456 120 24
7 SFANI 'TGATGAATTGCATC 2478 22 33
8 SFANI 'AGCTGAGGAGCATC 2795 317 45
9 SFANI 'GAGTGTGCTGCATC 2935 140 45
10 SFANI 'TTTTCCACGGCATC 3587 652 45
11 SFANI 'TCCAGGAGGGCATC 3767 180 55
12 SFANI GATGCGAGGG' 4406 639 55
13 SFANI GATGCCAGTG' 5469 1063 62
14 SFANI GATGCTGGCA' 6100 631 64
15 SFANI GATGCTGAGA' 6682 582 67
16 SFANI GATGCGTTAC' 7798 1116 88
17 SFANI 'CAGTGTTCAGCATC 7865 67 90
18 SFANI GATGCAGCCA' 7867 2 99
19 SFANI 'GACATGATAGCATC 8395 528 111
20 SFANI 'ATAGCATCAGCATC 8401 6 120
21 SFANI GATGCTCAGT' 8653 252 140
22 SFANI GATGCCCCTC' 9717 1064 147
23 SFANI 'TGGGCACCAGCATC 9772 55 148
24 SFANI 'GAGTGGCTTGCATC 11046 1274 150
25 SFANI GATGCTAATA' 11352 306 158
26 SFANI GATGCTTTAA' 11440 88 159
27 SFANI 'GTCTACCCAGCATC 11907 467 165
28 SFANI 'CTCAGATCGGCATC 12185 278 175
29 SFANI 'GCAGGACGTGCATC 12698 513 176
30 SFANI 'ACGCCGACTGCATC 12743 45 180
31 SFANI 'TCACCCTCAGCATC 12999 256 194
32 SFANI GATGCCCCTC' 14515 1516 244
33 SFANI 'AGGTGAAACGCATC 15028 513 247
34 SFANI 'TTTTCCACTGCATC 15052 24 252
35 SFANI 'TCCAGGAGGGCATC 15246 194 256
36 SFANI 'AGAGCAGAAGCATC 15652 406 276
37 SFANI 'AAGTGTACAGCATC 16262 610 278
38 SFANI 'TTGAAATTAGCATC 16324 62 306
39 SFANI GATGCAGAGA' 16423 99 317
40 SFANI GATGCTGGAT' 17756 1333 318
41 SFANI GATGCTGAGA' 18199 443 347
42 SFANI 'TCTTTAATCGCATC 18566 367 350
43 SFANI 'CCTGAGGGTGCATC 19298 732 367
44 SFANI 'TAAAGTGCTGCATC 19448 150 406
45 SFANI GATGCTCCTC' 20223 775 415
46 SFANI 'TGGGCACCAGCATC 20278 55 443
47 SFANI 'GTCAGGACAGCATC 21011 733 462
48 SFANI 'TAGACTTTAGCATC 21169 158 467
49 SFANI GATGCTAATA' 21675 506 506
50 SFANI GATGCAGTAT' 22723 1048 508
51 SFANI 'CTCAGATCGGCATC 22871 148 513
52 SFANI 'GCAGGACGTGCATC 23385 514 513
53 SFANI 'ACGCCGACTGCATC 23430 45 514
54 SFANI 'ACCAACAAAGCATC 24126 696 528
55 SFANI 'ACACATTCGGCATC 24402 276 582
56 SFANI 'GGAAGGTTTGCATC 24492 90 610
57 SFANI 'CCAGGTGCAGCATC 24556 64 631
58 SFANI 'ACGCCAGCTGCATC 25513 957 639
59 SFANI 'TCGCCGGGCGCATC 26021 508 646
60 SFANI 'CGGCTGGACGCATC 26196 175 652
61 SFANI 'TCACAGAGGGCATC 27019 823 696
62 SFANI GATGCGTCCA' 27052 33 724
63 SFANI 'TGCAGTACAGCATC 27228 176 732
64 SFANI GATGCGTCGA' 29230 2002 733
65 SFANI GATGCTTTAT' 29241 11 738
66 SFANI GATGCCGTAT' 29980 739 739
67 SFANI GATGCCCCGA' 30145 165 769
68 SFANI 'GATTCCCAGGCATC 30304 159 775
69 SFANI 'AAAATAAGCGCATC 31028 724 823
70 SFANI GATGCAACCC' 31443 415 851
71 SFANI GATGCATTTG' 32294 851 855
72 SFANI GATGCTGCGA' 32644 350 870
73 SFANI GATGCACAAA' 34217 1573 957
74 SFANI GATGCAAATT' 35489 1272 999
75 SFANI 'TGTGCGGCTGCATC 35489 - 1048
76 SFANI 'AATGTCAAGGCATC 35636 147 1063
77 SFANI 'GAGGGTGGTGCATC 36374 738 1064
78 SFANI 'GAAGAAAACGCATC 36721 347 1116
79 SFANI GATGCGGATG' 37367 646 1272
80 SFANI GATGCACTTT' 38136 769 1274
81 SFANI GATGCTCTTT' 38247 111 1333
82 SFANI GATGCGCATG' 39246 999 1516
83 SFANI GATGCTCATT' 39490 244 1573
462 2002
Matches found= 6
Name Sequence Position Fragment lengths
1 SMAI CCC'GGG 2560 2559 1749
2 SMAI CCC'GGG 8166 5606 2268
3 SMAI CCC'GGG 13680 5514 2559
4 SMAI CCC'GGG 25465 11785 5514
5 SMAI CCC'GGG 27214 1749 5606
6 SMAI CCC'GGG 37684 10470 10470
2268 11785
Matches found= 6
Name Sequence Position Fragment lengths
1 SNABI TAC'GTA 240 239 239
2 SNABI TAC'GTA 12619 12379 800
3 SNABI TAC'GTA 23306 10687 2208
4 SNABI TAC'GTA 29111 5805 5805
5 SNABI TAC'GTA 29911 800 7833
6 SNABI TAC'GTA 37744 7833 10687
2208 12379
Matches found= 5
Name Sequence Position Fragment lengths
1 SPEI A'CTAGT 5501 5500 636
2 SPEI A'CTAGT 12609 7108 4620
3 SPEI A'CTAGT 13245 636 5500
4 SPEI A'CTAGT 23296 10051 7108
5 SPEI A'CTAGT 35332 12036 10051
4620 12036
Matches found= 5
Name Sequence Position Fragment lengths
1 SPHI GCATG'C 6875 6874 521
2 SPHI GCATG'C 10935 4060 2350
3 SPHI GCATG'C 11456 521 4060
4 SPHI GCATG'C 29627 18171 6874
5 SPHI GCATG'C 31977 2350 7975
7975 18171
Matches found= 24
Name Sequence Position Fragment lengths
1 SSPI AAT'ATT 2495 2494 63
2 SSPI AAT'ATT 2835 340 72
3 SSPI AAT'ATT 4334 1499 96
4 SSPI AAT'ATT 5617 1283 268
5 SSPI AAT'ATT 6519 902 313
6 SSPI AAT'ATT 9534 3015 340
7 SSPI AAT'ATT 10005 471 458
8 SSPI AAT'ATT 10712 707 471
9 SSPI AAT'ATT 11890 1178 707
10 SSPI AAT'ATT 14073 2183 902
11 SSPI AAT'ATT 14145 72 944
12 SSPI AAT'ATT 15752 1607 1013
13 SSPI AAT'ATT 17265 1513 1060
14 SSPI AAT'ATT 17723 458 1178
15 SSPI AAT'ATT 18036 313 1283
16 SSPI AAT'ATT 19096 1060 1499
17 SSPI AAT'ATT 20040 944 1513
18 SSPI AAT'ATT 25096 5056 1607
19 SSPI AAT'ATT 30111 5015 1805
20 SSPI AAT'ATT 31916 1805 2183
21 SSPI AAT'ATT 38512 6596 2494
22 SSPI AAT'ATT 38575 63 3015
23 SSPI AAT'ATT 38843 268 5015
24 SSPI AAT'ATT 39856 1013 5056
96 6596
Matches found= 9
Name Sequence Position Fragment lengths
1 STUI AGG'CCT 1096 1095 290
2 STUI AGG'CCT 4677 3581 297
3 STUI AGG'CCT 6465 1788 855
4 STUI AGG'CCT 9693 3228 1095
5 STUI AGG'CCT 17395 7702 1362
6 STUI AGG'CCT 17692 297 1788
7 STUI AGG'CCT 17982 290 3228
8 STUI AGG'CCT 18837 855 3581
9 STUI AGG'CCT 20199 1362 7702
19753 19753
Matches found= 26
Name Sequence Position Fragment lengths
1 STYI C'CATGG 15 14 14
2 STYI C'CAAGG 1454 1439 42
3 STYI C'CAAGG 8944 7490 66
4 STYI C'CATGG 10625 1681 118
5 STYI C'CTTGG 10936 311 119
6 STYI C'CATGG 11270 334 202
7 STYI C'CTTGG 11603 333 287
8 STYI C'CATGG 12276 673 311
9 STYI C'CATGG 12394 118 333
10 STYI C'CAAGG 13940 1546 334
11 STYI C'CATGG 14006 66 481
12 STYI C'CATGG 14487 481 673
13 STYI C'CATGG 15777 1290 746
14 STYI C'CATGG 15979 202 839
15 STYI C'CATGG 16818 839 1040
16 STYI C'CATGG 21593 4775 1290
17 STYI C'CAAGG 21635 42 1439
18 STYI C'CTTGG 21922 287 1546
19 STYI C'CATGG 22962 1040 1679
20 STYI C'CATGG 23081 119 1681
21 STYI C'CATGG 25940 2859 1824
22 STYI C'CAAGG 29999 4059 2663
23 STYI C'CATGG 31823 1824 2859
24 STYI C'CTTGG 32569 746 3041
25 STYI C'CAAGG 35232 2663 4059
26 STYI C'CATGG 38273 3041 4775
1679 7490
Matches found= 12
Name Sequence Position Fragment lengths
1 TTHIIII GACT'GAGTC 4310 4309 40
2 TTHIIII GACT'GGGTC 7099 2789 972
3 TTHIIII GACG'GTGTC 12146 5047 1110
4 TTHIIII GACT'GGGTC 17445 5299 1177
5 TTHIIII GACT'GGGTC 18622 1177 1804
6 TTHIIII GACG'ACGTC 19594 972 2789
7 TTHIIII GACG'GTGTC 22832 3238 2962
8 TTHIIII GACT'GTGTC 25794 2962 3238
9 TTHIIII GACA'ATGTC 32909 7115 4089
10 TTHIIII GACC'AGGTC 36998 4089 4309
11 TTHIIII GACT'TCGTC 38802 1804 5047
12 TTHIIII GACG'GAGTC 39912 1110 5299
40 7115
Matches found= 4
Name Sequence Position Fragment lengths
1 XBAI T'CTAGA 3194 3193 2613
2 XBAI T'CTAGA 8269 5075 3193
3 XBAI T'CTAGA 11765 3496 3496
4 XBAI T'CTAGA 14378 2613 5075
25574 25574
Matches found= 5
Name Sequence Position Fragment lengths
1 XHOI C'TCGAG 2900 2899 1065
2 XHOI C'TCGAG 3965 1065 2649
3 XHOI C'TCGAG 6614 2649 2899
4 XHOI C'TCGAG 18131 11517 8957
5 XHOI C'TCGAG 27088 8957 11517
12864 12864
Matches found= 34
Name Sequence Position Fragment lengths
1 XHOII A'GATCT 1239 1238 25
2 XHOII A'GATCT 1656 417 122
3 XHOII A'GATCC 2021 365 129
4 XHOII A'GATCC 3765 1744 238
5 XHOII A'GATCT 5804 2039 248
6 XHOII G'GATCC 5926 122 312
7 XHOII G'GATCT 7362 1436 314
8 XHOII A'GATCC 8452 1090 365
9 XHOII A'GATCT 8477 25 417
10 XHOII A'GATCC 12887 4410 429
11 XHOII G'GATCT 13469 582 582
12 XHOII A'GATCT 14381 912 583
13 XHOII A'GATCC 15244 863 591
14 XHOII G'GATCC 16300 1056 623
15 XHOII G'GATCT 16891 591 805
16 XHOII A'GATCT 17474 583 863
17 XHOII G'GATCT 18279 805 912
18 XHOII A'GATCC 19365 1086 980
19 XHOII G'GATCC 19679 314 1040
20 XHOII A'GATCT 22161 2482 1056
21 XHOII G'GATCC 22399 238 1070
22 XHOII G'GATCT 24984 2585 1086
23 XHOII G'GATCC 26054 1070 1090
24 XHOII A'GATCT 26677 623 1238
25 XHOII A'GATCT 29020 2343 1348
26 XHOII A'GATCT 30060 1040 1436
27 XHOII A'GATCC 30489 429 1588
28 XHOII G'GATCT 33289 2800 1744
29 XHOII G'GATCT 33601 312 2039
30 XHOII A'GATCT 34581 980 2058
31 XHOII A'GATCC 36169 1588 2343
32 XHOII A'GATCC 37517 1348 2482
33 XHOII A'GATCC 37765 248 2585
34 XHOII A'GATCT 37894 129 2800
2058 4410
Matches found= 7
Name Sequence Position Fragment lengths
1 XMAIII C'GGCCG 3552 3551 1624
2 XMAIII C'GGCCG 6375 2823 2465
3 XMAIII C'GGCCG 13761 7386 2507
4 XMAIII C'GGCCG 15385 1624 2823
5 XMAIII C'GGCCG 17892 2507 3551
6 XMAIII C'GGCCG 20357 2465 5366
7 XMAIII C'GGCCG 25723 5366 7386
14229 14229
Matches found= 18
Name Sequence Position Fragment lengths
1 XMNI GAAGC'GCTTC 2008 2007 390
2 XMNI GAAGG'TGTTC 4635 2627 423
3 XMNI GAATT'TATTC 6001 1366 637
4 XMNI GAATA'TTTTC 10006 4005 673
5 XMNI GAAGA'CGTTC 19427 9421 752
6 XMNI GAATT'TTTTC 20684 1257 978
7 XMNI GAAGT'TCTTC 21357 673 996
8 XMNI GAACG'GTTTC 27380 6023 1153
9 XMNI GAATT'CCTTC 27770 390 1202
10 XMNI GAACT'GATTC 28522 752 1257
11 XMNI GAATG'CATTC 30764 2242 1366
12 XMNI GAAGC'CCTTC 31401 637 1716
13 XMNI GAATT'TATTC 33484 2083 2007
14 XMNI GAACC'AGTTC 35200 1716 2083
15 XMNI GAACC'CTTTC 36196 996 2242
16 XMNI GAAGC'GTTTC 36619 423 2627
17 XMNI GAATG'TTTTC 37821 1202 4005
18 XMNI GAATG'ACTTC 38799 978 6023